Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLCN4P51793 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN4P51793 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLCN4P51793 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN4P51793 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLCN4P51793 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CLCN4P51793 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLCN4P51793 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN4P51793 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLCN4P51793 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.72■□□□□ 0.27
CLCN4P51793 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN4P51793 CSF2RBP1-201ENST00000447905 391 ntBASIC16.72■□□□□ 0.27
CLCN4P51793 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 SLED1-202ENST00000512051 380 ntBASIC16.72■□□□□ 0.27
CLCN4P51793 RNA5SP412-201ENST00000516234 123 ntBASIC16.72■□□□□ 0.27
CLCN4P51793 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN4P51793 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN4P51793 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.72■□□□□ 0.27
CLCN4P51793 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN4P51793 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN4P51793 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN4P51793 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CLCN4P51793 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN4P51793 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN4P51793 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 AC099398.1-201ENST00000567919 2776 ntBASIC16.72■□□□□ 0.27
CLCN4P51793 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN4P51793 TUBB1P2-201ENST00000422712 1306 ntBASIC16.71■□□□□ 0.27
CLCN4P51793 TUBB1P1-201ENST00000503144 1300 ntBASIC16.71■□□□□ 0.27
CLCN4P51793 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
CLCN4P51793 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLCN4P51793 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CLCN4P51793 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLCN4P51793 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CLCN4P51793 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.71■□□□□ 0.27
CLCN4P51793 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.71■□□□□ 0.27
CLCN4P51793 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CLCN4P51793 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.71■□□□□ 0.27
CLCN4P51793 RPL7P3-201ENST00000441388 714 ntBASIC16.71■□□□□ 0.27
CLCN4P51793 AL355994.2-201ENST00000447882 704 ntBASIC16.71■□□□□ 0.27
CLCN4P51793 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN4P51793 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
CLCN4P51793 FO681548.1-201ENST00000455617 1132 ntBASIC16.71■□□□□ 0.27
CLCN4P51793 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.71■□□□□ 0.27
CLCN4P51793 RN7SL219P-201ENST00000582872 296 ntBASIC16.71■□□□□ 0.27
CLCN4P51793 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 AL049840.4-201ENST00000602422 811 ntBASIC16.71■□□□□ 0.27
CLCN4P51793 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.71■□□□□ 0.27
CLCN4P51793 MIR6869-201ENST00000619434 62 ntBASIC16.71■□□□□ 0.27
CLCN4P51793 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLCN4P51793 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN4P51793 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
CLCN4P51793 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLCN4P51793 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN4P51793 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN4P51793 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLCN4P51793 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms