Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.84□□□□□ -0.19
HCFC1P51610 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HCFC1P51610 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HCFC1P51610 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HCFC1P51610 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HCFC1P51610 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HCFC1P51610 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.83□□□□□ -0.2
HCFC1P51610 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 BAATP1-201ENST00000412284 1225 ntBASIC13.83□□□□□ -0.2
HCFC1P51610 AC016694.1-201ENST00000434179 700 ntBASIC13.83□□□□□ -0.2
HCFC1P51610 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.83□□□□□ -0.2
HCFC1P51610 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.83□□□□□ -0.2
HCFC1P51610 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.83□□□□□ -0.2
HCFC1P51610 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.83□□□□□ -0.2
HCFC1P51610 AC243960.2-201ENST00000600996 747 ntBASIC13.83□□□□□ -0.2
HCFC1P51610 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.83□□□□□ -0.2
HCFC1P51610 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HCFC1P51610 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 AC006449.5-201ENST00000610658 2098 ntBASIC13.83□□□□□ -0.2
HCFC1P51610 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.83□□□□□ -0.2
HCFC1P51610 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HCFC1P51610 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HCFC1P51610 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.83□□□□□ -0.2
HCFC1P51610 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.83□□□□□ -0.2
HCFC1P51610 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
HCFC1P51610 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.83□□□□□ -0.2
HCFC1P51610 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.83□□□□□ -0.2
HCFC1P51610 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.83□□□□□ -0.2
HCFC1P51610 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.83□□□□□ -0.2
HCFC1P51610 AC093433.1-201ENST00000458048 571 ntBASIC13.83□□□□□ -0.2
HCFC1P51610 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.83□□□□□ -0.2
HCFC1P51610 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.83□□□□□ -0.2
HCFC1P51610 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.83□□□□□ -0.2
HCFC1P51610 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.83□□□□□ -0.2
HCFC1P51610 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HCFC1P51610 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 DOC2GP-204ENST00000639052 2548 ntBASIC13.82□□□□□ -0.2
HCFC1P51610 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 BNIP3P1-202ENST00000550043 1585 ntBASIC13.82□□□□□ -0.2
HCFC1P51610 AC092364.2-201ENST00000596710 2692 ntBASIC13.82□□□□□ -0.2
HCFC1P51610 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HCFC1P51610 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.82□□□□□ -0.2
HCFC1P51610 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.82□□□□□ -0.2
HCFC1P51610 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.82□□□□□ -0.2
HCFC1P51610 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.82□□□□□ -0.2
HCFC1P51610 AC106760.1-201ENST00000508690 800 ntBASIC13.82□□□□□ -0.2
HCFC1P51610 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.82□□□□□ -0.2
HCFC1P51610 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.82□□□□□ -0.2
HCFC1P51610 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HCFC1P51610 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.82□□□□□ -0.2
HCFC1P51610 AC008894.3-201ENST00000624324 3103 ntBASIC13.82□□□□□ -0.2
HCFC1P51610 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.82□□□□□ -0.2
HCFC1P51610 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HCFC1P51610 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms