Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.71□□□□□ -0.37
CDC34P49427 GZMM-202ENST00000592501 941 ntTSL 3 BASIC12.71□□□□□ -0.37
CDC34P49427 AL121672.3-201ENST00000608644 468 ntBASIC12.71□□□□□ -0.37
CDC34P49427 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.71□□□□□ -0.37
CDC34P49427 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.71□□□□□ -0.37
CDC34P49427 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.71□□□□□ -0.37
CDC34P49427 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.71□□□□□ -0.37
CDC34P49427 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CDC34P49427 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 AC139749.1-202ENST00000617529 3139 ntBASIC12.71□□□□□ -0.37
CDC34P49427 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 LINC00528-201ENST00000600723 2160 ntBASIC12.71□□□□□ -0.37
CDC34P49427 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CDC34P49427 AC091951.1-201ENST00000512854 2465 ntBASIC12.71□□□□□ -0.37
CDC34P49427 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CDC34P49427 NSUN5P1-202ENST00000421140 1535 ntBASIC12.71□□□□□ -0.38
CDC34P49427 NSUN5P2-203ENST00000457352 1529 ntBASIC12.71□□□□□ -0.38
CDC34P49427 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC34P49427 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.71□□□□□ -0.38
CDC34P49427 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC34P49427 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC34P49427 AC232323.1-201ENST00000540724 2099 ntBASIC12.71□□□□□ -0.38
CDC34P49427 REXO1L5P-201ENST00000622260 2098 ntBASIC12.71□□□□□ -0.38
CDC34P49427 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.71□□□□□ -0.38
CDC34P49427 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC34P49427 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
CDC34P49427 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC34P49427 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.71□□□□□ -0.38
CDC34P49427 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.71□□□□□ -0.38
CDC34P49427 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CDC34P49427 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CDC34P49427 AC073508.3-201ENST00000619697 1419 ntBASIC12.71□□□□□ -0.38
CDC34P49427 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CDC34P49427 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.7□□□□□ -0.38
CDC34P49427 PRYP5-201ENST00000451909 266 ntBASIC12.7□□□□□ -0.38
CDC34P49427 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 AL160237.2-201ENST00000556165 472 ntBASIC12.7□□□□□ -0.38
CDC34P49427 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 AC064862.7-201ENST00000604520 867 ntBASIC12.7□□□□□ -0.38
CDC34P49427 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.7□□□□□ -0.38
CDC34P49427 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 C18orf15-201ENST00000623680 2534 ntBASIC12.7□□□□□ -0.38
CDC34P49427 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.7□□□□□ -0.38
CDC34P49427 AC011477.6-201ENST00000604980 1927 ntBASIC12.7□□□□□ -0.38
CDC34P49427 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CDC34P49427 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CDC34P49427 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CDC34P49427 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.69□□□□□ -0.38
CDC34P49427 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CDC34P49427 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.69□□□□□ -0.38
CDC34P49427 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.69□□□□□ -0.38
CDC34P49427 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CDC34P49427 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms