Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX1P48742 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.87■□□□□ 0.29
LHX1P48742 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX1P48742 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LHX1P48742 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX1P48742 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX1P48742 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX1P48742 AC023310.3-201ENST00000557027 670 ntBASIC16.87■□□□□ 0.29
LHX1P48742 AC100756.1-201ENST00000562736 682 ntBASIC16.87■□□□□ 0.29
LHX1P48742 AC138749.3-201ENST00000567691 622 ntBASIC16.87■□□□□ 0.29
LHX1P48742 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX1P48742 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.87■□□□□ 0.29
LHX1P48742 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX1P48742 AC099568.2-201ENST00000609194 695 ntBASIC16.87■□□□□ 0.29
LHX1P48742 AC116165.1-201ENST00000611806 668 ntBASIC16.87■□□□□ 0.29
LHX1P48742 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.87■□□□□ 0.29
LHX1P48742 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX1P48742 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX1P48742 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LHX1P48742 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX1P48742 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX1P48742 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX1P48742 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX1P48742 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LHX1P48742 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LHX1P48742 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX1P48742 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LHX1P48742 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.86■□□□□ 0.29
LHX1P48742 TOMM22P5-201ENST00000416399 439 ntBASIC16.86■□□□□ 0.29
LHX1P48742 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.86■□□□□ 0.29
LHX1P48742 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.86■□□□□ 0.29
LHX1P48742 SLED1-202ENST00000512051 380 ntBASIC16.86■□□□□ 0.29
LHX1P48742 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.86■□□□□ 0.29
LHX1P48742 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.86■□□□□ 0.29
LHX1P48742 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX1P48742 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LHX1P48742 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX1P48742 RARRES2P5-201ENST00000564013 466 ntBASIC16.86■□□□□ 0.29
LHX1P48742 AL603832.2-201ENST00000566195 2125 ntBASIC16.86■□□□□ 0.29
LHX1P48742 RRP7BP-205ENST00000566851 833 ntBASIC16.86■□□□□ 0.29
LHX1P48742 TP53TG3HP-202ENST00000569755 579 ntBASIC16.86■□□□□ 0.29
LHX1P48742 AC140912.1-201ENST00000577171 1054 ntBASIC16.86■□□□□ 0.29
LHX1P48742 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX1P48742 AL358472.5-202ENST00000641448 1267 ntBASIC16.86■□□□□ 0.29
LHX1P48742 AF228730.6-201ENST00000641497 218 ntBASIC16.86■□□□□ 0.29
LHX1P48742 AC084121.3-201ENST00000641716 218 ntBASIC16.86■□□□□ 0.29
LHX1P48742 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX1P48742 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
LHX1P48742 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX1P48742 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LHX1P48742 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LHX1P48742 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.86■□□□□ 0.29
LHX1P48742 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.86■□□□□ 0.29
LHX1P48742 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
LHX1P48742 AL607033.1-201ENST00000623900 1599 ntBASIC16.85■□□□□ 0.29
LHX1P48742 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
LHX1P48742 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 AC112504.1-201ENST00000623415 1841 ntBASIC16.85■□□□□ 0.29
LHX1P48742 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX1P48742 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX1P48742 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LHX1P48742 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LHX1P48742 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.85■□□□□ 0.29
LHX1P48742 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.85■□□□□ 0.29
LHX1P48742 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
LHX1P48742 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.85■□□□□ 0.29
LHX1P48742 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.85■□□□□ 0.29
LHX1P48742 AC105233.6-201ENST00000642093 218 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms