Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 AC079328.2-201ENST00000561241 3354 ntBASIC15.1■□□□□ 0.01
GABRA4P48169 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.1■□□□□ 0.01
GABRA4P48169 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
GABRA4P48169 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA4P48169 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA4P48169 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA4P48169 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA4P48169 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GABRA4P48169 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 LINC02447-202ENST00000501888 2146 ntBASIC15.09■□□□□ 0.01
GABRA4P48169 SLED1-202ENST00000512051 380 ntBASIC15.09■□□□□ 0.01
GABRA4P48169 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
GABRA4P48169 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA4P48169 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA4P48169 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
GABRA4P48169 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 AC008494.3-201ENST00000606615 944 ntBASIC15.09■□□□□ 0.01
GABRA4P48169 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.09■□□□□ 0.01
GABRA4P48169 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 AC007431.3-201ENST00000623221 587 ntBASIC15.09■□□□□ 0.01
GABRA4P48169 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA4P48169 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GABRA4P48169 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.09■□□□□ 0.01
GABRA4P48169 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.09■□□□□ 0.01
GABRA4P48169 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA4P48169 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.08■□□□□ 0.01
GABRA4P48169 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA4P48169 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
GABRA4P48169 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA4P48169 AL603832.2-201ENST00000566195 2125 ntBASIC15.08■□□□□ 0.01
GABRA4P48169 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA4P48169 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA4P48169 AC112504.1-201ENST00000623415 1841 ntBASIC15.08■□□□□ 0.01
GABRA4P48169 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.08■□□□□ 0.01
GABRA4P48169 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
GABRA4P48169 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.08■□□□□ 0.01
GABRA4P48169 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
GABRA4P48169 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
GABRA4P48169 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
GABRA4P48169 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.08■□□□□ 0
GABRA4P48169 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.08■□□□□ 0
GABRA4P48169 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABRA4P48169 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.08■□□□□ 0
GABRA4P48169 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
GABRA4P48169 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
GABRA4P48169 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.08■□□□□ 0
GABRA4P48169 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.08■□□□□ 0
GABRA4P48169 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
GABRA4P48169 GAPDHP21-201ENST00000450301 1010 ntBASIC15.08■□□□□ 0
GABRA4P48169 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.08■□□□□ 0
GABRA4P48169 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.08■□□□□ 0
GABRA4P48169 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.08■□□□□ 0
GABRA4P48169 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.08■□□□□ 0
GABRA4P48169 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.08■□□□□ 0
GABRA4P48169 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.08■□□□□ 0
GABRA4P48169 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.08■□□□□ 0
GABRA4P48169 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.08■□□□□ 0
GABRA4P48169 MIR4313-201ENST00000580760 101 ntBASIC15.08■□□□□ 0
GABRA4P48169 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.08■□□□□ 0
GABRA4P48169 MIR8072-201ENST00000614241 80 ntBASIC15.08■□□□□ 0
GABRA4P48169 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.08■□□□□ 0
GABRA4P48169 AL358472.5-202ENST00000641448 1267 ntBASIC15.08■□□□□ 0
GABRA4P48169 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABRA4P48169 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABRA4P48169 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GABRA4P48169 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.08■□□□□ 0
GABRA4P48169 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms