Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 AC013355.1-201ENST00000562625 723 ntBASIC20.01■□□□□ 0.79
ITGB4P16144 RN7SL574P-201ENST00000581512 297 ntBASIC20.01■□□□□ 0.79
ITGB4P16144 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITGB4P16144 AC015818.8-201ENST00000587907 1519 ntBASIC20.01■□□□□ 0.79
ITGB4P16144 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITGB4P16144 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITGB4P16144 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ITGB4P16144 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ITGB4P16144 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ITGB4P16144 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ITGB4P16144 AC022211.2-201ENST00000585075 2527 ntBASIC20■□□□□ 0.79
ITGB4P16144 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ITGB4P16144 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ITGB4P16144 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ITGB4P16144 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20■□□□□ 0.79
ITGB4P16144 ELK2AP-201ENST00000392510 1007 ntBASIC20■□□□□ 0.79
ITGB4P16144 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20■□□□□ 0.79
ITGB4P16144 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20■□□□□ 0.79
ITGB4P16144 NKAIN1P1-201ENST00000435754 582 ntBASIC20■□□□□ 0.79
ITGB4P16144 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC20■□□□□ 0.79
ITGB4P16144 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC20■□□□□ 0.79
ITGB4P16144 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20■□□□□ 0.79
ITGB4P16144 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20■□□□□ 0.79
ITGB4P16144 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 LRRC59-203ENST00000576448 1531 ntBASIC20■□□□□ 0.79
ITGB4P16144 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20■□□□□ 0.79
ITGB4P16144 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ITGB4P16144 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 AL139094.1-201ENST00000405549 1188 ntBASIC19.99■□□□□ 0.79
ITGB4P16144 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.99■□□□□ 0.79
ITGB4P16144 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.99■□□□□ 0.79
ITGB4P16144 AC022217.1-201ENST00000521069 738 ntBASIC19.99■□□□□ 0.79
ITGB4P16144 AP001505.2-201ENST00000616815 443 ntBASIC19.99■□□□□ 0.79
ITGB4P16144 AC091812.3-201ENST00000621362 345 ntBASIC19.99■□□□□ 0.79
ITGB4P16144 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.99■□□□□ 0.79
ITGB4P16144 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.99■□□□□ 0.79
ITGB4P16144 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.99■□□□□ 0.79
ITGB4P16144 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.99■□□□□ 0.79
ITGB4P16144 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.99■□□□□ 0.79
ITGB4P16144 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.99■□□□□ 0.79
ITGB4P16144 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.99■□□□□ 0.79
ITGB4P16144 AC104982.3-201ENST00000581995 514 ntBASIC19.99■□□□□ 0.79
ITGB4P16144 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.99■□□□□ 0.79
ITGB4P16144 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.99■□□□□ 0.79
ITGB4P16144 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ITGB4P16144 AL158070.2-201ENST00000623713 1621 ntBASIC19.99■□□□□ 0.79
ITGB4P16144 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGB4P16144 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.98■□□□□ 0.79
ITGB4P16144 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ITGB4P16144 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ITGB4P16144 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.98■□□□□ 0.79
ITGB4P16144 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGB4P16144 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.98■□□□□ 0.79
ITGB4P16144 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGB4P16144 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
ITGB4P16144 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGB4P16144 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ITGB4P16144 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.98■□□□□ 0.79
ITGB4P16144 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.98■□□□□ 0.79
ITGB4P16144 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ITGB4P16144 AC016700.1-201ENST00000429424 312 ntBASIC19.98■□□□□ 0.79
ITGB4P16144 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.98■□□□□ 0.79
ITGB4P16144 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.98■□□□□ 0.79
ITGB4P16144 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.98■□□□□ 0.79
ITGB4P16144 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.98■□□□□ 0.79
ITGB4P16144 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.98■□□□□ 0.79
ITGB4P16144 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.98■□□□□ 0.79
ITGB4P16144 AC011477.6-201ENST00000604980 1927 ntBASIC19.98■□□□□ 0.79
ITGB4P16144 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ITGB4P16144 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.98■□□□□ 0.79
ITGB4P16144 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ITGB4P16144 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ITGB4P16144 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms