Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ERCC1P07992 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ERCC1P07992 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.27□□□□□ -0.13
ERCC1P07992 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 MIR3909-201ENST00000579518 119 ntBASIC14.27□□□□□ -0.13
ERCC1P07992 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.27□□□□□ -0.13
ERCC1P07992 AL009183.1-201ENST00000603760 355 ntBASIC14.27□□□□□ -0.13
ERCC1P07992 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.27□□□□□ -0.13
ERCC1P07992 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.27□□□□□ -0.13
ERCC1P07992 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 AP005117.1-202ENST00000581724 1908 ntBASIC14.27□□□□□ -0.13
ERCC1P07992 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ERCC1P07992 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ERCC1P07992 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.27□□□□□ -0.13
ERCC1P07992 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERCC1P07992 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.26□□□□□ -0.13
ERCC1P07992 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.26□□□□□ -0.13
ERCC1P07992 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ERCC1P07992 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 AC010491.1-201ENST00000563101 2797 ntBASIC14.26□□□□□ -0.13
ERCC1P07992 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.26□□□□□ -0.13
ERCC1P07992 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.26□□□□□ -0.13
ERCC1P07992 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.26□□□□□ -0.13
ERCC1P07992 HMGA1P7-201ENST00000406908 502 ntBASIC14.26□□□□□ -0.13
ERCC1P07992 TFAMP1-201ENST00000412727 736 ntBASIC14.26□□□□□ -0.13
ERCC1P07992 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.26□□□□□ -0.13
ERCC1P07992 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.26□□□□□ -0.13
ERCC1P07992 AC023141.5-201ENST00000458585 616 ntBASIC14.26□□□□□ -0.13
ERCC1P07992 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.26□□□□□ -0.13
ERCC1P07992 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.26□□□□□ -0.13
ERCC1P07992 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.26□□□□□ -0.13
ERCC1P07992 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.26□□□□□ -0.13
ERCC1P07992 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.26□□□□□ -0.13
ERCC1P07992 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ERCC1P07992 AL031055.1-201ENST00000606362 631 ntBASIC14.26□□□□□ -0.13
ERCC1P07992 AC021097.1-201ENST00000607902 574 ntBASIC14.26□□□□□ -0.13
ERCC1P07992 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.26□□□□□ -0.13
ERCC1P07992 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.26□□□□□ -0.13
ERCC1P07992 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.26□□□□□ -0.13
ERCC1P07992 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.26□□□□□ -0.13
ERCC1P07992 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.26□□□□□ -0.13
ERCC1P07992 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.26□□□□□ -0.13
ERCC1P07992 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ERCC1P07992 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.26□□□□□ -0.13
ERCC1P07992 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.26□□□□□ -0.13
ERCC1P07992 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ERCC1P07992 LINC02447-202ENST00000501888 2146 ntBASIC14.26□□□□□ -0.13
ERCC1P07992 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERCC1P07992 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.26□□□□□ -0.13
ERCC1P07992 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
ERCC1P07992 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.25□□□□□ -0.13
ERCC1P07992 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ERCC1P07992 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ERCC1P07992 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC1P07992 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ERCC1P07992 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 AC126177.1-201ENST00000547829 2218 ntBASIC14.25□□□□□ -0.13
ERCC1P07992 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.25□□□□□ -0.13
ERCC1P07992 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 CDC14C-201ENST00000428251 1719 ntBASIC14.25□□□□□ -0.13
ERCC1P07992 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ERCC1P07992 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms