Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC23.46■■□□□ 1.35
RAPGEF3O95398 AC098935.1-201ENST00000446057 611 ntBASIC23.46■■□□□ 1.35
RAPGEF3O95398 HIST2H2BB-201ENST00000449108 381 ntBASIC23.46■■□□□ 1.35
RAPGEF3O95398 AC100850.1-201ENST00000506768 649 ntBASIC23.46■■□□□ 1.35
RAPGEF3O95398 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
RAPGEF3O95398 PTK2-225ENST00000520892 571 ntTSL 4 BASIC23.46■■□□□ 1.35
RAPGEF3O95398 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC23.46■■□□□ 1.35
RAPGEF3O95398 CENPX-208ENST00000584347 799 ntTSL 2 BASIC23.46■■□□□ 1.35
RAPGEF3O95398 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC23.46■■□□□ 1.35
RAPGEF3O95398 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF3O95398 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
RAPGEF3O95398 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RAPGEF3O95398 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
RAPGEF3O95398 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
RAPGEF3O95398 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 AC011742.3-201ENST00000439053 820 ntBASIC23.45■■□□□ 1.34
RAPGEF3O95398 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 RN7SL181P-201ENST00000462921 277 ntBASIC23.45■■□□□ 1.34
RAPGEF3O95398 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 PGAM1P5-201ENST00000548011 764 ntBASIC23.45■■□□□ 1.34
RAPGEF3O95398 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 AC103988.2-201ENST00000561804 725 ntBASIC23.45■■□□□ 1.34
RAPGEF3O95398 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 RN7SL713P-201ENST00000582127 302 ntBASIC23.45■■□□□ 1.34
RAPGEF3O95398 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC23.45■■□□□ 1.34
RAPGEF3O95398 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RAPGEF3O95398 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 KRT8P4-201ENST00000509735 1454 ntBASIC23.44■■□□□ 1.34
RAPGEF3O95398 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 AL353770.1-201ENST00000614915 403 ntBASIC23.44■■□□□ 1.34
RAPGEF3O95398 CDK7-214ENST00000626796 358 ntTSL 5 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
RAPGEF3O95398 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RAPGEF3O95398 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 SLC16A6P1-201ENST00000413214 1059 ntBASIC23.43■■□□□ 1.34
RAPGEF3O95398 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAPGEF3O95398 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC23.43■■□□□ 1.34
RAPGEF3O95398 PRSS30P-206ENST00000641773 873 ntBASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms