Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 IMP3P2-201ENST00000489760 475 ntBASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 AC138649.2-201ENST00000615886 705 ntBASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CDC42BPBQ9Y5S2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 AC011676.5-201ENST00000624864 2660 ntBASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 AC079328.1-201ENST00000560358 952 ntBASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 RN7SL574P-201ENST00000581512 297 ntBASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 PPY2P-201ENST00000582808 702 ntBASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 AL139094.1-201ENST00000405549 1188 ntBASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 HINT2P1-201ENST00000419438 481 ntBASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 AC022217.1-201ENST00000521069 738 ntBASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 AP001505.2-201ENST00000616815 443 ntBASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC23.59■■□□□ 1.37
CDC42BPBQ9Y5S2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 AC124067.4-201ENST00000519691 2379 ntBASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 AC080080.1-201ENST00000625121 2420 ntBASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 FAM8A4P-201ENST00000435433 1213 ntBASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 AC025181.2-201ENST00000606994 802 ntBASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 ENPP7P14-201ENST00000621765 1040 ntBASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDC42BPBQ9Y5S2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC23.58■■□□□ 1.36
CDC42BPBQ9Y5S2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 NKAIN1P1-201ENST00000435754 582 ntBASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 RETN-203ENST00000629642 400 ntTSL 5 BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDC42BPBQ9Y5S2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms