Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 HNRNPUP1-201ENST00000554987 333 ntBASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
DENND2AQ9ULE3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 RN7SL399P-201ENST00000471648 279 ntBASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 AC104596.2-201ENST00000512793 793 ntBASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 MIR8072-201ENST00000614241 80 ntBASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 IGHV3-72-202ENST00000621503 303 ntBASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 AL158212.4-201ENST00000624062 1286 ntBASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
DENND2AQ9ULE3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 AL512384.1-201ENST00000406683 331 ntBASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 TOMM22P5-201ENST00000416399 439 ntBASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 AC244107.1-201ENST00000442033 332 ntBASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.27■□□□□ 0.68
DENND2AQ9ULE3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
DENND2AQ9ULE3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.27■□□□□ 0.67
DENND2AQ9ULE3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DENND2AQ9ULE3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.26■□□□□ 0.67
DENND2AQ9ULE3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms