Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 AL391825.1-201ENST00000457671 1364 ntBASIC16.86■□□□□ 0.29
CDH9Q9ULB4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 AC087499.6-201ENST00000411576 835 ntBASIC16.85■□□□□ 0.29
CDH9Q9ULB4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 AC015922.1-201ENST00000421102 1152 ntBASIC16.85■□□□□ 0.29
CDH9Q9ULB4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 AC055876.2-201ENST00000531834 546 ntBASIC16.85■□□□□ 0.29
CDH9Q9ULB4 API5-211ENST00000534695 560 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 AC027307.3-201ENST00000594262 1100 ntBASIC16.85■□□□□ 0.29
CDH9Q9ULB4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CDH9Q9ULB4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AC018892.3-201ENST00000623986 2499 ntBASIC16.84■□□□□ 0.29
CDH9Q9ULB4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AC023310.3-201ENST00000557027 670 ntBASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AC100756.1-201ENST00000562736 682 ntBASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AC138749.3-201ENST00000567691 622 ntBASIC16.84■□□□□ 0.29
CDH9Q9ULB4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AC116165.1-201ENST00000611806 668 ntBASIC16.84■□□□□ 0.29
CDH9Q9ULB4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.84■□□□□ 0.29
CDH9Q9ULB4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AF228730.6-201ENST00000641497 218 ntBASIC16.84■□□□□ 0.29
CDH9Q9ULB4 AC084121.3-201ENST00000641716 218 ntBASIC16.84■□□□□ 0.29
CDH9Q9ULB4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 SLC7A15P-201ENST00000424028 1363 ntBASIC16.84■□□□□ 0.29
CDH9Q9ULB4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH9Q9ULB4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms