Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC3Q92529 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC3Q92529 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC3Q92529 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC3Q92529 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SHC3Q92529 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SHC3Q92529 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SHC3Q92529 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.03■□□□□ 0.32
SHC3Q92529 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SHC3Q92529 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SHC3Q92529 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.03■□□□□ 0.32
SHC3Q92529 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SHC3Q92529 FO393414.2-201ENST00000405153 598 ntBASIC17.03■□□□□ 0.32
SHC3Q92529 MIR1233-2-201ENST00000408138 82 ntBASIC17.03■□□□□ 0.32
SHC3Q92529 MIR1233-1-201ENST00000408722 82 ntBASIC17.03■□□□□ 0.32
SHC3Q92529 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.03■□□□□ 0.32
SHC3Q92529 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.03■□□□□ 0.32
SHC3Q92529 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.03■□□□□ 0.32
SHC3Q92529 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.03■□□□□ 0.32
SHC3Q92529 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.03■□□□□ 0.32
SHC3Q92529 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.03■□□□□ 0.32
SHC3Q92529 AC069262.1-201ENST00000539058 672 ntBASIC17.03■□□□□ 0.32
SHC3Q92529 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.03■□□□□ 0.32
SHC3Q92529 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.03■□□□□ 0.32
SHC3Q92529 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SHC3Q92529 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.03■□□□□ 0.32
SHC3Q92529 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 LINC00628-201ENST00000628516 1289 ntBASIC17.03■□□□□ 0.32
SHC3Q92529 TMBIM7P-203ENST00000641617 1718 ntBASIC17.03■□□□□ 0.32
SHC3Q92529 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 AC009090.5-201ENST00000624886 2285 ntBASIC17.03■□□□□ 0.32
SHC3Q92529 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SHC3Q92529 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 KRT8P12-202ENST00000472924 1397 ntBASIC17.02■□□□□ 0.32
SHC3Q92529 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.02■□□□□ 0.32
SHC3Q92529 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.02■□□□□ 0.32
SHC3Q92529 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SHC3Q92529 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SHC3Q92529 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.02■□□□□ 0.32
SHC3Q92529 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 AL139400.1-201ENST00000366220 510 ntBASIC17.02■□□□□ 0.32
SHC3Q92529 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.02■□□□□ 0.32
SHC3Q92529 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.02■□□□□ 0.32
SHC3Q92529 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.02■□□□□ 0.32
SHC3Q92529 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.02■□□□□ 0.32
SHC3Q92529 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.02■□□□□ 0.32
SHC3Q92529 AC109322.1-201ENST00000524499 1264 ntBASIC17.02■□□□□ 0.32
SHC3Q92529 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.02■□□□□ 0.32
SHC3Q92529 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.02■□□□□ 0.32
SHC3Q92529 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SHC3Q92529 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.02■□□□□ 0.32
SHC3Q92529 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.02■□□□□ 0.32
SHC3Q92529 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.02■□□□□ 0.32
SHC3Q92529 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SHC3Q92529 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.02■□□□□ 0.32
SHC3Q92529 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.02■□□□□ 0.31
SHC3Q92529 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.31
SHC3Q92529 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
SHC3Q92529 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SHC3Q92529 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
SHC3Q92529 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SHC3Q92529 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SHC3Q92529 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.01■□□□□ 0.31
SHC3Q92529 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SHC3Q92529 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC3Q92529 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SHC3Q92529 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms