Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 HCG11-201ENST00000411553 5696 ntBASIC19.84■□□□□ 0.77
RC3H1Q5TC82 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 POM121L10P-201ENST00000436994 1285 ntBASIC19.83■□□□□ 0.77
RC3H1Q5TC82 AC114812.1-204ENST00000449669 728 ntBASIC19.83■□□□□ 0.77
RC3H1Q5TC82 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.83■□□□□ 0.77
RC3H1Q5TC82 MIR3619-201ENST00000579667 83 ntBASIC19.83■□□□□ 0.77
RC3H1Q5TC82 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RC3H1Q5TC82 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RC3H1Q5TC82 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RC3H1Q5TC82 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.83■□□□□ 0.76
RC3H1Q5TC82 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RC3H1Q5TC82 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RC3H1Q5TC82 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RC3H1Q5TC82 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 AC018892.3-201ENST00000623986 2499 ntBASIC19.82■□□□□ 0.76
RC3H1Q5TC82 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 CNN2P10-201ENST00000443067 918 ntBASIC19.82■□□□□ 0.76
RC3H1Q5TC82 HIST2H2BC-201ENST00000498492 580 ntBASIC19.82■□□□□ 0.76
RC3H1Q5TC82 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 AC105129.2-201ENST00000559536 390 ntBASIC19.82■□□□□ 0.76
RC3H1Q5TC82 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 AC016629.1-201ENST00000596579 586 ntBASIC19.82■□□□□ 0.76
RC3H1Q5TC82 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.82■□□□□ 0.76
RC3H1Q5TC82 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RC3H1Q5TC82 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 AC005052.1-201ENST00000625181 2492 ntBASIC19.81■□□□□ 0.76
RC3H1Q5TC82 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.81■□□□□ 0.76
RC3H1Q5TC82 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 KLF2P2-201ENST00000416807 1039 ntBASIC19.81■□□□□ 0.76
RC3H1Q5TC82 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.81■□□□□ 0.76
RC3H1Q5TC82 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms