Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
GFRA1P56159 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.3□□□□□ -0.12
GFRA1P56159 API5-211ENST00000534695 560 ntTSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
GFRA1P56159 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.3□□□□□ -0.12
GFRA1P56159 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 AL662799.1-202ENST00000614205 422 ntBASIC14.3□□□□□ -0.12
GFRA1P56159 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 AL391825.1-201ENST00000457671 1364 ntBASIC14.3□□□□□ -0.12
GFRA1P56159 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
GFRA1P56159 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.3□□□□□ -0.12
GFRA1P56159 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
GFRA1P56159 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
GFRA1P56159 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
GFRA1P56159 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
GFRA1P56159 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
GFRA1P56159 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GFRA1P56159 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.29□□□□□ -0.12
GFRA1P56159 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.29□□□□□ -0.12
GFRA1P56159 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.29□□□□□ -0.12
GFRA1P56159 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.29□□□□□ -0.12
GFRA1P56159 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.29□□□□□ -0.12
GFRA1P56159 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 MEP1AP4-201ENST00000423244 1087 ntBASIC14.29□□□□□ -0.12
GFRA1P56159 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.29□□□□□ -0.12
GFRA1P56159 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.29□□□□□ -0.12
GFRA1P56159 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.29□□□□□ -0.12
GFRA1P56159 TPRX2P-201ENST00000535362 881 ntBASIC14.29□□□□□ -0.12
GFRA1P56159 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
GFRA1P56159 AC023310.3-201ENST00000557027 670 ntBASIC14.29□□□□□ -0.12
GFRA1P56159 AC100756.1-201ENST00000562736 682 ntBASIC14.29□□□□□ -0.12
GFRA1P56159 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
GFRA1P56159 AC138749.3-201ENST00000567691 622 ntBASIC14.29□□□□□ -0.12
GFRA1P56159 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.29□□□□□ -0.12
GFRA1P56159 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.29□□□□□ -0.12
GFRA1P56159 AC116165.1-201ENST00000611806 668 ntBASIC14.29□□□□□ -0.12
GFRA1P56159 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
GFRA1P56159 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 SLC7A15P-201ENST00000424028 1363 ntBASIC14.29□□□□□ -0.12
GFRA1P56159 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
GFRA1P56159 AL603832.2-201ENST00000566195 2125 ntBASIC14.29□□□□□ -0.12
GFRA1P56159 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GFRA1P56159 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
GFRA1P56159 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.28□□□□□ -0.12
GFRA1P56159 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.28□□□□□ -0.12
GFRA1P56159 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.28□□□□□ -0.12
GFRA1P56159 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GFRA1P56159 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.28□□□□□ -0.12
GFRA1P56159 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GFRA1P56159 MEIS3P1-201ENST00000495167 958 ntBASIC14.28□□□□□ -0.12
GFRA1P56159 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.28□□□□□ -0.12
GFRA1P56159 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GFRA1P56159 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.28□□□□□ -0.12
GFRA1P56159 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms