Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 LINC02447-202ENST00000501888 2146 ntBASIC22.45■■□□□ 1.18
CLTCL1P53675 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC22.45■■□□□ 1.18
CLTCL1P53675 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC22.45■■□□□ 1.18
CLTCL1P53675 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC22.45■■□□□ 1.18
CLTCL1P53675 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
CLTCL1P53675 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC22.45■■□□□ 1.18
CLTCL1P53675 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC22.45■■□□□ 1.18
CLTCL1P53675 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 AC006033.1-201ENST00000440505 426 ntBASIC22.45■■□□□ 1.18
CLTCL1P53675 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC22.45■■□□□ 1.18
CLTCL1P53675 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC22.45■■□□□ 1.18
CLTCL1P53675 KLK3-211ENST00000597483 810 ntTSL 2 BASIC22.45■■□□□ 1.18
CLTCL1P53675 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC22.45■■□□□ 1.18
CLTCL1P53675 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CLTCL1P53675 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC22.44■■□□□ 1.18
CLTCL1P53675 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CLTCL1P53675 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 MIR326-201ENST00000362220 95 ntBASIC22.44■■□□□ 1.18
CLTCL1P53675 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 SUN1-204ENST00000403868 978 ntTSL 2 BASIC22.44■■□□□ 1.18
CLTCL1P53675 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC22.44■■□□□ 1.18
CLTCL1P53675 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CLTCL1P53675 KRT18P25-201ENST00000508931 1278 ntBASIC22.44■■□□□ 1.18
CLTCL1P53675 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC22.44■■□□□ 1.18
CLTCL1P53675 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CLTCL1P53675 AC025181.2-201ENST00000606994 802 ntBASIC22.44■■□□□ 1.18
CLTCL1P53675 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC22.44■■□□□ 1.18
CLTCL1P53675 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CLTCL1P53675 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC22.44■■□□□ 1.18
CLTCL1P53675 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CLTCL1P53675 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC22.44■■□□□ 1.18
CLTCL1P53675 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CLTCL1P53675 GCK-209ENST00000616242 2260 ntTSL 5 BASIC22.44■■□□□ 1.18
CLTCL1P53675 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC22.43■■□□□ 1.18
CLTCL1P53675 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC22.43■■□□□ 1.18
CLTCL1P53675 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC22.43■■□□□ 1.18
CLTCL1P53675 AC006001.1-201ENST00000325130 474 ntBASIC22.43■■□□□ 1.18
CLTCL1P53675 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 PGGT1BP2-201ENST00000398621 1028 ntBASIC22.43■■□□□ 1.18
CLTCL1P53675 KLF2P2-201ENST00000416807 1039 ntBASIC22.43■■□□□ 1.18
CLTCL1P53675 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CLTCL1P53675 PFN2-215ENST00000497148 743 ntTSL 4 BASIC22.43■■□□□ 1.18
CLTCL1P53675 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC22.43■■□□□ 1.18
CLTCL1P53675 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC22.43■■□□□ 1.18
CLTCL1P53675 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC22.43■■□□□ 1.18
CLTCL1P53675 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC22.43■■□□□ 1.18
CLTCL1P53675 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CLTCL1P53675 TKT-202ENST00000423516 2075 ntTSL 2 BASIC22.43■■□□□ 1.18
CLTCL1P53675 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC22.43■■□□□ 1.18
CLTCL1P53675 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CLTCL1P53675 AL138799.1-201ENST00000448213 1675 ntBASIC22.43■■□□□ 1.18
CLTCL1P53675 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC22.43■■□□□ 1.18
CLTCL1P53675 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLTCL1P53675 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLTCL1P53675 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLTCL1P53675 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CLTCL1P53675 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLTCL1P53675 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC22.42■■□□□ 1.18
CLTCL1P53675 GOLGA2P4-201ENST00000441462 777 ntBASIC22.42■■□□□ 1.18
CLTCL1P53675 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC22.42■■□□□ 1.18
CLTCL1P53675 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC22.42■■□□□ 1.18
CLTCL1P53675 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC22.42■■□□□ 1.18
CLTCL1P53675 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC22.42■■□□□ 1.18
CLTCL1P53675 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLTCL1P53675 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CLTCL1P53675 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC22.42■■□□□ 1.18
CLTCL1P53675 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC22.42■■□□□ 1.18
CLTCL1P53675 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC22.42■■□□□ 1.18
CLTCL1P53675 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms