Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LBX1P52954 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LBX1P52954 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.68■□□□□ 0.42
LBX1P52954 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.68■□□□□ 0.42
LBX1P52954 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LBX1P52954 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.68■□□□□ 0.42
LBX1P52954 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.68■□□□□ 0.42
LBX1P52954 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.68■□□□□ 0.42
LBX1P52954 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.68■□□□□ 0.42
LBX1P52954 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.68■□□□□ 0.42
LBX1P52954 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.68■□□□□ 0.42
LBX1P52954 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LBX1P52954 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.68■□□□□ 0.42
LBX1P52954 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.68■□□□□ 0.42
LBX1P52954 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBX1P52954 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.68■□□□□ 0.42
LBX1P52954 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LBX1P52954 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBX1P52954 AC148477.4-201ENST00000613430 1793 ntBASIC17.68■□□□□ 0.42
LBX1P52954 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LBX1P52954 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBX1P52954 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LBX1P52954 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.68■□□□□ 0.42
LBX1P52954 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.67■□□□□ 0.42
LBX1P52954 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 CAP2P1-201ENST00000557743 1390 ntBASIC17.67■□□□□ 0.42
LBX1P52954 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 LINC02012-201ENST00000608206 1725 ntBASIC17.67■□□□□ 0.42
LBX1P52954 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 BX323043.1-201ENST00000641006 1765 ntBASIC17.67■□□□□ 0.42
LBX1P52954 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LBX1P52954 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC17.67■□□□□ 0.42
LBX1P52954 Z69890.1-201ENST00000382990 339 ntBASIC17.67■□□□□ 0.42
LBX1P52954 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 POM121L8P-201ENST00000417732 1281 ntBASIC17.67■□□□□ 0.42
LBX1P52954 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.67■□□□□ 0.42
LBX1P52954 POM121L9P-203ENST00000441984 1285 ntBASIC17.67■□□□□ 0.42
LBX1P52954 PHKG1P2-201ENST00000457537 863 ntBASIC17.67■□□□□ 0.42
LBX1P52954 RN7SL67P-201ENST00000492147 296 ntBASIC17.67■□□□□ 0.42
LBX1P52954 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC17.67■□□□□ 0.42
LBX1P52954 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.67■□□□□ 0.42
LBX1P52954 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LBX1P52954 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LBX1P52954 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LBX1P52954 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LBX1P52954 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LBX1P52954 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LBX1P52954 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LBX1P52954 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LBX1P52954 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.67■□□□□ 0.42
LBX1P52954 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 LETM1P2-201ENST00000597330 2178 ntBASIC17.67■□□□□ 0.42
LBX1P52954 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LBX1P52954 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.67■□□□□ 0.42
LBX1P52954 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LBX1P52954 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.67■□□□□ 0.42
LBX1P52954 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LBX1P52954 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.67■□□□□ 0.42
LBX1P52954 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.67■□□□□ 0.42
LBX1P52954 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LBX1P52954 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.66■□□□□ 0.42
LBX1P52954 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC17.66■□□□□ 0.42
LBX1P52954 AC136604.1-201ENST00000418535 575 ntBASIC17.66■□□□□ 0.42
LBX1P52954 RPL8P2-201ENST00000430538 502 ntBASIC17.66■□□□□ 0.42
LBX1P52954 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.66■□□□□ 0.42
LBX1P52954 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 AL391280.1-201ENST00000506969 1062 ntBASIC17.66■□□□□ 0.42
LBX1P52954 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.66■□□□□ 0.42
LBX1P52954 POU5F1P2-201ENST00000521750 823 ntBASIC17.66■□□□□ 0.42
LBX1P52954 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.66■□□□□ 0.42
LBX1P52954 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.66■□□□□ 0.42
LBX1P52954 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC17.66■□□□□ 0.42
LBX1P52954 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.66■□□□□ 0.42
LBX1P52954 AC105137.3-201ENST00000617588 984 ntBASIC17.66■□□□□ 0.42
LBX1P52954 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 PCGF3-213ENST00000620529 1899 ntBASIC17.66■□□□□ 0.42
LBX1P52954 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms