Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
VAMP1P23763 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VAMP1P23763 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.61□□□□□ -0.23
VAMP1P23763 CICP4-201ENST00000447359 2812 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 AC005622.1-201ENST00000636801 1703 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
VAMP1P23763 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.61□□□□□ -0.23
VAMP1P23763 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.61□□□□□ -0.23
VAMP1P23763 LINC01101-201ENST00000622953 1884 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 LINC00528-201ENST00000600723 2160 ntBASIC13.61□□□□□ -0.23
VAMP1P23763 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.61□□□□□ -0.23
VAMP1P23763 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.61□□□□□ -0.23
VAMP1P23763 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VAMP1P23763 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.6□□□□□ -0.23
VAMP1P23763 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
VAMP1P23763 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VAMP1P23763 CICP23-201ENST00000605013 2741 ntBASIC13.6□□□□□ -0.23
VAMP1P23763 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VAMP1P23763 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.6□□□□□ -0.23
VAMP1P23763 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VAMP1P23763 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
VAMP1P23763 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.6□□□□□ -0.23
VAMP1P23763 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.6□□□□□ -0.23
VAMP1P23763 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.6□□□□□ -0.23
VAMP1P23763 SIGLEC16-201ENST00000599858 1437 ntBASIC13.6□□□□□ -0.23
VAMP1P23763 AC083849.1-201ENST00000615227 514 ntBASIC13.6□□□□□ -0.23
VAMP1P23763 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.6□□□□□ -0.23
VAMP1P23763 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.6□□□□□ -0.23
VAMP1P23763 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 AP000867.4-201ENST00000641616 219 ntBASIC13.6□□□□□ -0.23
VAMP1P23763 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VAMP1P23763 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.6□□□□□ -0.23
VAMP1P23763 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VAMP1P23763 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VAMP1P23763 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
VAMP1P23763 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VAMP1P23763 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VAMP1P23763 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
VAMP1P23763 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VAMP1P23763 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.59□□□□□ -0.23
VAMP1P23763 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VAMP1P23763 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VAMP1P23763 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VAMP1P23763 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VAMP1P23763 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
VAMP1P23763 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
VAMP1P23763 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VAMP1P23763 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms