Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.17■□□□□ 0.66
CHGBP05060 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHGBP05060 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CHGBP05060 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHGBP05060 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.16■□□□□ 0.66
CHGBP05060 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHGBP05060 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 AP005117.1-202ENST00000581724 1908 ntBASIC19.16■□□□□ 0.66
CHGBP05060 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 FO393414.2-201ENST00000405153 598 ntBASIC19.16■□□□□ 0.66
CHGBP05060 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.16■□□□□ 0.66
CHGBP05060 AC114501.2-201ENST00000439631 535 ntBASIC19.16■□□□□ 0.66
CHGBP05060 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.16■□□□□ 0.66
CHGBP05060 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 AL450472.2-201ENST00000603663 1156 ntBASIC19.16■□□□□ 0.66
CHGBP05060 MIR6069-201ENST00000620069 79 ntBASIC19.16■□□□□ 0.66
CHGBP05060 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHGBP05060 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHGBP05060 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
CHGBP05060 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHGBP05060 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHGBP05060 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CHGBP05060 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
CHGBP05060 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CHGBP05060 Z97205.2-201ENST00000564697 1639 ntBASIC19.15■□□□□ 0.66
CHGBP05060 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHGBP05060 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHGBP05060 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHGBP05060 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHGBP05060 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.15■□□□□ 0.66
CHGBP05060 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.15■□□□□ 0.66
CHGBP05060 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.15■□□□□ 0.66
CHGBP05060 AC138761.1-201ENST00000584393 385 ntBASIC19.15■□□□□ 0.66
CHGBP05060 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.15■□□□□ 0.66
CHGBP05060 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.15■□□□□ 0.66
CHGBP05060 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHGBP05060 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHGBP05060 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CHGBP05060 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHGBP05060 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHGBP05060 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHGBP05060 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHGBP05060 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.14■□□□□ 0.66
CHGBP05060 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHGBP05060 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.14■□□□□ 0.66
CHGBP05060 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.14■□□□□ 0.65
CHGBP05060 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
CHGBP05060 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.14■□□□□ 0.65
CHGBP05060 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.14■□□□□ 0.65
CHGBP05060 RPL13P2-201ENST00000440687 659 ntBASIC19.14■□□□□ 0.65
CHGBP05060 SERBP1P3-201ENST00000459980 809 ntBASIC19.14■□□□□ 0.65
CHGBP05060 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHGBP05060 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.14■□□□□ 0.65
CHGBP05060 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.14■□□□□ 0.65
CHGBP05060 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.14■□□□□ 0.65
CHGBP05060 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms