Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TIMP1P01033 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.06■□□□□ 0.32
TIMP1P01033 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TIMP1P01033 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TIMP1P01033 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMP1P01033 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMP1P01033 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 AC005915.1-201ENST00000624912 2018 ntBASIC17.05■□□□□ 0.32
TIMP1P01033 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TIMP1P01033 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMP1P01033 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMP1P01033 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMP1P01033 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.05■□□□□ 0.32
TIMP1P01033 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 SPCS2P2-201ENST00000603270 608 ntBASIC17.05■□□□□ 0.32
TIMP1P01033 AC091812.3-201ENST00000621362 345 ntBASIC17.05■□□□□ 0.32
TIMP1P01033 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TIMP1P01033 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
TIMP1P01033 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.05■□□□□ 0.32
TIMP1P01033 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 AL354989.2-201ENST00000435838 1540 ntBASIC17.05■□□□□ 0.32
TIMP1P01033 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.05■□□□□ 0.32
TIMP1P01033 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TIMP1P01033 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TIMP1P01033 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TIMP1P01033 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TIMP1P01033 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TIMP1P01033 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMP1P01033 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.04■□□□□ 0.32
TIMP1P01033 AC105020.1-201ENST00000435356 2205 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.04■□□□□ 0.32
TIMP1P01033 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 CYP46A4P-201ENST00000414953 267 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMP1P01033 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 LDHBP1-201ENST00000455730 1119 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TIMP1P01033 AC245884.6-201ENST00000515672 1067 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.04■□□□□ 0.32
TIMP1P01033 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.04■□□□□ 0.32
TIMP1P01033 RN7SL48P-201ENST00000579283 293 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.04■□□□□ 0.32
TIMP1P01033 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMP1P01033 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.04■□□□□ 0.32
TIMP1P01033 ECM1P1-201ENST00000604092 1279 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 U62317.3-201ENST00000608319 855 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 CU633904.3-201ENST00000624042 1029 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 AC128714.1-201ENST00000637035 887 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
TIMP1P01033 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMP1P01033 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
TIMP1P01033 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TIMP1P01033 AC068880.1-201ENST00000507289 2297 ntBASIC17.04■□□□□ 0.32
TIMP1P01033 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TIMP1P01033 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMP1P01033 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.04■□□□□ 0.32
TIMP1P01033 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TIMP1P01033 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.03■□□□□ 0.32
TIMP1P01033 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.03■□□□□ 0.32
TIMP1P01033 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.03■□□□□ 0.32
TIMP1P01033 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TIMP1P01033 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.03■□□□□ 0.32
TIMP1P01033 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms