Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 KRT18P64-201ENST00000434946 1219 ntBASIC15.18■□□□□ 0.02
FAM60AQ9NP50 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 AC093004.1-201ENST00000508850 424 ntBASIC15.18■□□□□ 0.02
FAM60AQ9NP50 TIMM17BP1-201ENST00000545713 516 ntBASIC15.18■□□□□ 0.02
FAM60AQ9NP50 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 SLC7A15P-201ENST00000424028 1363 ntBASIC15.18■□□□□ 0.02
FAM60AQ9NP50 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
FAM60AQ9NP50 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AC010491.1-201ENST00000563101 2797 ntBASIC15.17■□□□□ 0.02
FAM60AQ9NP50 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AL607033.1-201ENST00000623900 1599 ntBASIC15.17■□□□□ 0.02
FAM60AQ9NP50 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AC136604.1-201ENST00000418535 575 ntBASIC15.17■□□□□ 0.02
FAM60AQ9NP50 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 MEIS3P1-201ENST00000495167 958 ntBASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 TP53TG3HP-202ENST00000569755 579 ntBASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.17■□□□□ 0.02
FAM60AQ9NP50 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AL603832.2-201ENST00000566195 2125 ntBASIC15.17■□□□□ 0.02
FAM60AQ9NP50 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FAM60AQ9NP50 AP003680.1-201ENST00000598970 3660 ntBASIC15.16■□□□□ 0.02
FAM60AQ9NP50 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 AC112504.1-201ENST00000623415 1841 ntBASIC15.16■□□□□ 0.02
FAM60AQ9NP50 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FAM60AQ9NP50 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms