Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AL132994.2-201ENST00000603120 687 ntBASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AL109837.1-201ENST00000603272 613 ntBASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AC254633.1-201ENST00000606790 345 ntBASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AC110057.1-201ENST00000636031 898 ntBASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AL691432.1-201ENST00000596308 1422 ntBASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AC093525.9-201ENST00000624961 1746 ntBASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
COL25A1Q9BXS0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 RNU1-114P-201ENST00000365297 166 ntBASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 WASH7P-201ENST00000488147 1351 ntBASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 BCL2L12P1-201ENST00000508390 733 ntBASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 PSME2-217ENST00000615264 874 ntTSL 5 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 PSME2-218ENST00000630027 185 ntTSL 3 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.81■□□□□ 0.12
COL25A1Q9BXS0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 AC005332.7-201ENST00000614046 2005 ntBASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 AL138799.1-201ENST00000448213 1675 ntBASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 AC026320.2-201ENST00000434379 478 ntBASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 AC018846.1-201ENST00000568231 183 ntBASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 NUDT4P2-201ENST00000578341 546 ntBASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 AC012073.1-201ENST00000606114 1108 ntBASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
COL25A1Q9BXS0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
COL25A1Q9BXS0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL25A1Q9BXS0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.79■□□□□ 0.12
COL25A1Q9BXS0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
COL25A1Q9BXS0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.79■□□□□ 0.12
COL25A1Q9BXS0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
COL25A1Q9BXS0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
COL25A1Q9BXS0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms