Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ALOX12P2-203ENST00000570921 1945 ntBASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
SSBP3Q9BWW4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 AL133215.2-201ENST00000609242 977 ntBASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 TEX28P1-201ENST00000613479 1221 ntBASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 TEX28P2-201ENST00000617764 1221 ntBASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SSBP3Q9BWW4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 RPL37AP1-201ENST00000412502 279 ntBASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 SERBP1P3-201ENST00000459980 809 ntBASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 AC005052.1-201ENST00000625181 2492 ntBASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP3Q9BWW4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms