Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC007064.4-201ENST00000637740 555 ntBASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 AC079781.3-201ENST00000449110 356 ntBASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 AL773604.1-201ENST00000617417 272 ntBASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 AC116407.3-201ENST00000623905 1129 ntBASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 AC018892.3-201ENST00000623986 2499 ntBASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC44A1Q8WWI5 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC44A1Q8WWI5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 AL031284.1-201ENST00000419297 478 ntBASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC44A1Q8WWI5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms