Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC83Q8IWF9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 AC142381.1-201ENST00000426099 345 ntBASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC83Q8IWF9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 AC023824.1-201ENST00000562945 2975 ntBASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 AC243562.1-201ENST00000560672 389 ntBASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 AC008267.7-201ENST00000624570 1194 ntBASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 AC009090.5-201ENST00000624886 2285 ntBASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 BNIP3P1-202ENST00000550043 1585 ntBASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC83Q8IWF9 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 AL691432.1-201ENST00000596308 1422 ntBASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC83Q8IWF9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms