Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 FAM87A-204ENST00000613235 858 ntBASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 AC141257.4-201ENST00000634557 245 ntBASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 AC136944.6-201ENST00000634818 245 ntBASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 PCGF3-213ENST00000620529 1899 ntBASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 AC010327.5-201ENST00000586923 3061 ntBASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KCNIP4Q6PIL6 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 SLC25A3P1-201ENST00000443844 931 ntBASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 DUX4L17-201ENST00000557360 1267 ntBASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 STK25P1-201ENST00000585406 838 ntBASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 AC004263.2-201ENST00000617183 678 ntBASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.49□□□□□ -0.41
KCNIP4Q6PIL6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KCNIP4Q6PIL6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms