Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AC138951.2-201ENST00000623455 1161 ntBASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNKSR3Q6P9H4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 AL133267.1-201ENST00000398220 340 ntBASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 BTBD6P1-201ENST00000412176 1267 ntBASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CNKSR3Q6P9H4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 AHCYP2-201ENST00000430630 1300 ntBASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 RHOQP1-201ENST00000555758 579 ntBASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CNKSR3Q6P9H4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNKSR3Q6P9H4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.02■□□□□ 0.31
CNKSR3Q6P9H4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CNKSR3Q6P9H4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNKSR3Q6P9H4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNKSR3Q6P9H4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNKSR3Q6P9H4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CNKSR3Q6P9H4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.01■□□□□ 0.31
CNKSR3Q6P9H4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms