Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC004987.2-201ENST00000395959 1148 ntBASIC18.67■□□□□ 0.58
CCDC96Q2M329 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC96Q2M329 HAUS4P1-201ENST00000406739 1145 ntBASIC18.67■□□□□ 0.58
CCDC96Q2M329 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC96Q2M329 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC96Q2M329 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC96Q2M329 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC96Q2M329 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC96Q2M329 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC96Q2M329 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC96Q2M329 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 BTBD7P1-201ENST00000447253 1453 ntBASIC18.66■□□□□ 0.58
CCDC96Q2M329 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 AC015922.1-201ENST00000421102 1152 ntBASIC18.66■□□□□ 0.58
CCDC96Q2M329 GNAQP1-201ENST00000444815 1067 ntBASIC18.66■□□□□ 0.58
CCDC96Q2M329 SDHAP3-202ENST00000515467 728 ntBASIC18.66■□□□□ 0.58
CCDC96Q2M329 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC96Q2M329 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC96Q2M329 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 PIN1P1-201ENST00000412108 996 ntBASIC18.65■□□□□ 0.58
CCDC96Q2M329 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 HIST3H2BA-201ENST00000436555 524 ntBASIC18.65■□□□□ 0.58
CCDC96Q2M329 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 CRB3P1-201ENST00000449338 276 ntBASIC18.65■□□□□ 0.58
CCDC96Q2M329 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 AL132655.2-201ENST00000596276 594 ntBASIC18.65■□□□□ 0.58
CCDC96Q2M329 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC96Q2M329 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 DOC2GP-204ENST00000639052 2548 ntBASIC18.65■□□□□ 0.58
CCDC96Q2M329 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC96Q2M329 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms