Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3AP84243 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.35□□□□□ -0.11
H3F3AP84243 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3AP84243 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3AP84243 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.35□□□□□ -0.11
H3F3AP84243 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3AP84243 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
H3F3AP84243 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
H3F3AP84243 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.35□□□□□ -0.11
H3F3AP84243 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
H3F3AP84243 KRT8P12-202ENST00000472924 1397 ntBASIC14.34□□□□□ -0.11
H3F3AP84243 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H3F3AP84243 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3AP84243 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.34□□□□□ -0.11
H3F3AP84243 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3AP84243 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3AP84243 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 AC022188.1-201ENST00000620960 1664 ntBASIC14.34□□□□□ -0.11
H3F3AP84243 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
H3F3AP84243 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
H3F3AP84243 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.34□□□□□ -0.11
H3F3AP84243 AL079307.3-201ENST00000556114 283 ntBASIC14.34□□□□□ -0.11
H3F3AP84243 AC140878.1-201ENST00000565277 250 ntBASIC14.34□□□□□ -0.11
H3F3AP84243 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3AP84243 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.34□□□□□ -0.11
H3F3AP84243 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 AC068587.6-202ENST00000641839 5619 ntBASIC14.34□□□□□ -0.11
H3F3AP84243 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
H3F3AP84243 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
H3F3AP84243 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
H3F3AP84243 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
H3F3AP84243 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.33□□□□□ -0.11
H3F3AP84243 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
H3F3AP84243 KRT8P37-201ENST00000451609 1420 ntBASIC14.33□□□□□ -0.11
H3F3AP84243 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
H3F3AP84243 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.33□□□□□ -0.11
H3F3AP84243 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
H3F3AP84243 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 FO393414.2-201ENST00000405153 598 ntBASIC14.33□□□□□ -0.12
H3F3AP84243 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.33□□□□□ -0.12
H3F3AP84243 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 FAM86GP-201ENST00000448322 971 ntBASIC14.33□□□□□ -0.12
H3F3AP84243 HLA-V-204ENST00000476601 1289 ntBASIC14.33□□□□□ -0.12
H3F3AP84243 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.33□□□□□ -0.12
H3F3AP84243 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.33□□□□□ -0.12
H3F3AP84243 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.33□□□□□ -0.12
H3F3AP84243 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
H3F3AP84243 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
H3F3AP84243 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms