Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.66■□□□□ 0.42
GPC3P51654 EEF1DP4-201ENST00000446006 880 ntBASIC17.66■□□□□ 0.42
GPC3P51654 AL589987.1-201ENST00000453380 819 ntBASIC17.66■□□□□ 0.42
GPC3P51654 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GPC3P51654 AC093004.1-201ENST00000508850 424 ntBASIC17.66■□□□□ 0.42
GPC3P51654 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC3P51654 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC3P51654 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC3P51654 AC243562.2-201ENST00000561247 970 ntBASIC17.66■□□□□ 0.42
GPC3P51654 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC3P51654 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.66■□□□□ 0.42
GPC3P51654 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC3P51654 AC140912.1-201ENST00000577171 1054 ntBASIC17.66■□□□□ 0.42
GPC3P51654 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC3P51654 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
GPC3P51654 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
GPC3P51654 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC3P51654 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
GPC3P51654 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GPC3P51654 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC3P51654 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC3P51654 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
GPC3P51654 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GPC3P51654 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GPC3P51654 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
GPC3P51654 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GPC3P51654 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GPC3P51654 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC3P51654 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
GPC3P51654 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.65■□□□□ 0.42
GPC3P51654 AC074044.1-201ENST00000609673 707 ntBASIC17.65■□□□□ 0.42
GPC3P51654 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
GPC3P51654 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GPC3P51654 AL391825.1-201ENST00000457671 1364 ntBASIC17.65■□□□□ 0.42
GPC3P51654 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GPC3P51654 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.65■□□□□ 0.42
GPC3P51654 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GPC3P51654 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
GPC3P51654 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
GPC3P51654 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.64■□□□□ 0.41
GPC3P51654 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 COX5BP8-201ENST00000416911 349 ntBASIC17.64■□□□□ 0.41
GPC3P51654 NME2P1-201ENST00000426182 414 ntBASIC17.64■□□□□ 0.41
GPC3P51654 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC3P51654 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.64■□□□□ 0.41
GPC3P51654 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.64■□□□□ 0.41
GPC3P51654 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms