Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC21.29■■□□□ 1
USP6P35125 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.29■■□□□ 1
USP6P35125 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC21.29■■□□□ 1
USP6P35125 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
USP6P35125 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC21.29■■□□□ 1
USP6P35125 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.29■■□□□ 1
USP6P35125 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
USP6P35125 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC21.29■■□□□ 1
USP6P35125 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
USP6P35125 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC21.29■■□□□ 1
USP6P35125 PFN1P12-201ENST00000455938 534 ntBASIC21.29■■□□□ 1
USP6P35125 AL590640.2-201ENST00000457038 527 ntBASIC21.29■■□□□ 1
USP6P35125 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC21.29■■□□□ 1
USP6P35125 IGHV3OR16-16-201ENST00000563644 343 ntBASIC21.29■■□□□ 1
USP6P35125 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC21.29■■□□□ 1
USP6P35125 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC21.29■■□□□ 1
USP6P35125 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC21.29■■□□□ 1
USP6P35125 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC21.29■■□□□ 1
USP6P35125 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP6P35125 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.28■■□□□ 1
USP6P35125 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.28■■□□□ 1
USP6P35125 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
USP6P35125 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP6P35125 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.28■■□□□ 1
USP6P35125 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
USP6P35125 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.28■■□□□ 1
USP6P35125 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP6P35125 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.28■■□□□ 1
USP6P35125 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
USP6P35125 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP6P35125 RNU1-114P-201ENST00000365297 166 ntBASIC21.28■■□□□ 1
USP6P35125 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP6P35125 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP6P35125 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC21.28■■□□□ 1
USP6P35125 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.28■■□□□ 1
USP6P35125 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP6P35125 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
USP6P35125 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
USP6P35125 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.27■■□□□ 1
USP6P35125 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC21.27■■□□□ 1
USP6P35125 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
USP6P35125 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.27■■□□□ 1
USP6P35125 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 ACTBP8-201ENST00000403258 1108 ntBASIC21.27■■□□□ 1
USP6P35125 NME6-203ENST00000415644 849 ntTSL 2 BASIC21.27■■□□□ 1
USP6P35125 GPAA1P2-201ENST00000417923 928 ntBASIC21.27■■□□□ 1
USP6P35125 GOLGA2P4-201ENST00000441462 777 ntBASIC21.27■■□□□ 1
USP6P35125 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC21.27■■□□□ 1
USP6P35125 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC21.27■■□□□ 1
USP6P35125 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.27■■□□□ 1
USP6P35125 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP6P35125 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
USP6P35125 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
USP6P35125 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.26■□□□□ 0.99
USP6P35125 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC21.26■□□□□ 0.99
USP6P35125 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
USP6P35125 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.26■□□□□ 0.99
USP6P35125 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.26■□□□□ 0.99
USP6P35125 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 AC006033.1-201ENST00000440505 426 ntBASIC21.26■□□□□ 0.99
USP6P35125 PFN2-215ENST00000497148 743 ntTSL 4 BASIC21.26■□□□□ 0.99
USP6P35125 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.26■□□□□ 0.99
USP6P35125 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
USP6P35125 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC21.26■□□□□ 0.99
USP6P35125 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC21.26■□□□□ 0.99
USP6P35125 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC21.26■□□□□ 0.99
USP6P35125 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21.26■□□□□ 0.99
USP6P35125 AC145423.3-201ENST00000615987 467 ntBASIC21.26■□□□□ 0.99
USP6P35125 GPR39-203ENST00000622084 900 ntTSL 5 BASIC21.26■□□□□ 0.99
USP6P35125 AL139099.5-201ENST00000635274 300 ntBASIC21.26■□□□□ 0.99
USP6P35125 ABBA01031663.1-201ENST00000635630 790 ntBASIC21.26■□□□□ 0.99
USP6P35125 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC21.26■□□□□ 0.99
USP6P35125 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.26■□□□□ 0.99
USP6P35125 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP6P35125 KRT8P35-201ENST00000483942 1338 ntBASIC21.26■□□□□ 0.99
USP6P35125 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms