Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.84■□□□□ 0.61
TOP1P11387 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.84■□□□□ 0.61
TOP1P11387 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.84■□□□□ 0.61
TOP1P11387 SERBP1P3-201ENST00000459980 809 ntBASIC18.84■□□□□ 0.61
TOP1P11387 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.84■□□□□ 0.61
TOP1P11387 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.84■□□□□ 0.61
TOP1P11387 AC022188.1-201ENST00000620960 1664 ntBASIC18.84■□□□□ 0.61
TOP1P11387 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.84■□□□□ 0.61
TOP1P11387 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TOP1P11387 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TOP1P11387 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.84■□□□□ 0.61
TOP1P11387 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP1P11387 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.84■□□□□ 0.61
TOP1P11387 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOP1P11387 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOP1P11387 AC132872.4-202ENST00000622924 2756 ntBASIC18.83■□□□□ 0.61
TOP1P11387 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.61
TOP1P11387 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.83■□□□□ 0.61
TOP1P11387 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TOP1P11387 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
TOP1P11387 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOP1P11387 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.83■□□□□ 0.61
TOP1P11387 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOP1P11387 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.83■□□□□ 0.61
TOP1P11387 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOP1P11387 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TOP1P11387 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP1P11387 MIR661-201ENST00000384842 89 ntBASIC18.83■□□□□ 0.6
TOP1P11387 AC004987.2-201ENST00000395959 1148 ntBASIC18.83■□□□□ 0.6
TOP1P11387 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.83■□□□□ 0.6
TOP1P11387 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TOP1P11387 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.83■□□□□ 0.6
TOP1P11387 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.83■□□□□ 0.6
TOP1P11387 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.83■□□□□ 0.6
TOP1P11387 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.83■□□□□ 0.6
TOP1P11387 RN7SL618P-201ENST00000477850 296 ntBASIC18.83■□□□□ 0.6
TOP1P11387 AL512361.1-201ENST00000554200 418 ntBASIC18.83■□□□□ 0.6
TOP1P11387 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.83■□□□□ 0.6
TOP1P11387 AC243562.2-201ENST00000561247 970 ntBASIC18.83■□□□□ 0.6
TOP1P11387 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.83■□□□□ 0.6
TOP1P11387 AC009407.1-201ENST00000568958 598 ntBASIC18.83■□□□□ 0.6
TOP1P11387 AL033527.5-202ENST00000641632 1098 ntBASIC18.83■□□□□ 0.6
TOP1P11387 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.83■□□□□ 0.6
TOP1P11387 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TOP1P11387 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TOP1P11387 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.83■□□□□ 0.6
TOP1P11387 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP1P11387 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.83■□□□□ 0.6
TOP1P11387 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TOP1P11387 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP1P11387 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.83■□□□□ 0.6
TOP1P11387 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP1P11387 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TOP1P11387 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
TOP1P11387 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TOP1P11387 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
TOP1P11387 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
TOP1P11387 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP1P11387 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.82■□□□□ 0.6
TOP1P11387 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TOP1P11387 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TOP1P11387 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.82■□□□□ 0.6
TOP1P11387 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TOP1P11387 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.82■□□□□ 0.6
TOP1P11387 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.82■□□□□ 0.6
TOP1P11387 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.82■□□□□ 0.6
TOP1P11387 ZNF890P-202ENST00000530367 1156 ntBASIC18.82■□□□□ 0.6
TOP1P11387 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.82■□□□□ 0.6
TOP1P11387 AC010336.2-201ENST00000564226 506 ntBASIC18.82■□□□□ 0.6
TOP1P11387 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.82■□□□□ 0.6
TOP1P11387 RN7SL204P-201ENST00000582831 262 ntBASIC18.82■□□□□ 0.6
TOP1P11387 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TOP1P11387 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
TOP1P11387 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.82■□□□□ 0.6
TOP1P11387 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.82■□□□□ 0.6
TOP1P11387 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.82■□□□□ 0.6
TOP1P11387 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms