Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 NDUFAB1P1-201ENST00000404262 460 ntBASIC18.05■□□□□ 0.48
ALDH1A1P00352 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 RN7SL48P-201ENST00000579283 293 ntBASIC18.05■□□□□ 0.48
ALDH1A1P00352 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AC007663.3-201ENST00000609632 465 ntBASIC18.05■□□□□ 0.48
ALDH1A1P00352 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 AP001282.1-201ENST00000531301 1499 ntBASIC18.05■□□□□ 0.48
ALDH1A1P00352 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ALDH1A1P00352 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ALDH1A1P00352 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 AC092978.1-202ENST00000637590 1327 ntBASIC18.04■□□□□ 0.48
ALDH1A1P00352 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 TPM3P8-201ENST00000330554 643 ntBASIC18.04■□□□□ 0.48
ALDH1A1P00352 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.04■□□□□ 0.48
ALDH1A1P00352 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 HNRNPUP1-201ENST00000554987 333 ntBASIC18.04■□□□□ 0.48
ALDH1A1P00352 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 AC244157.2-201ENST00000616239 1006 ntBASIC18.04■□□□□ 0.48
ALDH1A1P00352 BX539320.1-201ENST00000623759 877 ntBASIC18.04■□□□□ 0.48
ALDH1A1P00352 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ALDH1A1P00352 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ALDH1A1P00352 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 AC091046.1-201ENST00000331871 207 ntBASIC18.03■□□□□ 0.48
ALDH1A1P00352 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 AL133267.1-201ENST00000398220 340 ntBASIC18.03■□□□□ 0.48
ALDH1A1P00352 Z97180.1-201ENST00000445173 988 ntBASIC18.03■□□□□ 0.48
ALDH1A1P00352 SERPINA13P-202ENST00000478994 924 ntBASIC18.03■□□□□ 0.48
ALDH1A1P00352 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms