Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.22■□□□□ 0.35
CSPG5O95196 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.22■□□□□ 0.35
CSPG5O95196 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CSPG5O95196 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.22■□□□□ 0.35
CSPG5O95196 AL139010.1-201ENST00000454878 894 ntBASIC17.22■□□□□ 0.35
CSPG5O95196 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.22■□□□□ 0.35
CSPG5O95196 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.22■□□□□ 0.35
CSPG5O95196 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.22■□□□□ 0.35
CSPG5O95196 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CSPG5O95196 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.22■□□□□ 0.35
CSPG5O95196 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.22■□□□□ 0.35
CSPG5O95196 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.22■□□□□ 0.35
CSPG5O95196 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.22■□□□□ 0.35
CSPG5O95196 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.22■□□□□ 0.35
CSPG5O95196 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 GPAA1P2-202ENST00000606848 1787 ntBASIC17.22■□□□□ 0.35
CSPG5O95196 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CSPG5O95196 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.22■□□□□ 0.35
CSPG5O95196 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSPG5O95196 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.21■□□□□ 0.35
CSPG5O95196 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CSPG5O95196 AL136982.4-201ENST00000437689 1740 ntBASIC17.21■□□□□ 0.35
CSPG5O95196 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CSPG5O95196 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.21■□□□□ 0.35
CSPG5O95196 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.21■□□□□ 0.35
CSPG5O95196 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.21■□□□□ 0.35
CSPG5O95196 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.21■□□□□ 0.35
CSPG5O95196 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CSPG5O95196 CTBP2P5-201ENST00000454986 1264 ntBASIC17.21■□□□□ 0.35
CSPG5O95196 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.21■□□□□ 0.35
CSPG5O95196 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.21■□□□□ 0.35
CSPG5O95196 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.21■□□□□ 0.35
CSPG5O95196 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.21■□□□□ 0.35
CSPG5O95196 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CSPG5O95196 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSPG5O95196 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CSPG5O95196 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.21■□□□□ 0.34
CSPG5O95196 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.21■□□□□ 0.34
CSPG5O95196 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.34
CSPG5O95196 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CSPG5O95196 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CSPG5O95196 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.2■□□□□ 0.34
CSPG5O95196 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.2■□□□□ 0.34
CSPG5O95196 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CSPG5O95196 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.2■□□□□ 0.34
CSPG5O95196 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.2■□□□□ 0.34
CSPG5O95196 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.2■□□□□ 0.34
CSPG5O95196 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.2■□□□□ 0.34
CSPG5O95196 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.2■□□□□ 0.34
CSPG5O95196 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.2■□□□□ 0.34
CSPG5O95196 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.2■□□□□ 0.34
CSPG5O95196 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSPG5O95196 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CSPG5O95196 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms