Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.48■□□□□ 0.07
SLC28A1O00337 RNA5SP416-201ENST00000516838 111 ntBASIC15.48■□□□□ 0.07
SLC28A1O00337 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC28A1O00337 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC28A1O00337 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC28A1O00337 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.48■□□□□ 0.07
SLC28A1O00337 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.48■□□□□ 0.07
SLC28A1O00337 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.48■□□□□ 0.07
SLC28A1O00337 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC28A1O00337 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC28A1O00337 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC28A1O00337 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC28A1O00337 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC28A1O00337 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC28A1O00337 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC28A1O00337 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SLC28A1O00337 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SLC28A1O00337 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.48■□□□□ 0.07
SLC28A1O00337 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.48■□□□□ 0.07
SLC28A1O00337 AC136621.1-201ENST00000624017 2304 ntBASIC15.48■□□□□ 0.07
SLC28A1O00337 AC006058.4-201ENST00000624016 1670 ntBASIC15.48■□□□□ 0.07
SLC28A1O00337 CICP13-201ENST00000422015 2789 ntBASIC15.47■□□□□ 0.07
SLC28A1O00337 IL9RP2-201ENST00000423948 1312 ntBASIC15.47■□□□□ 0.07
SLC28A1O00337 AKAP8P1-201ENST00000434743 1349 ntBASIC15.47■□□□□ 0.07
SLC28A1O00337 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC28A1O00337 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 AC126755.1-201ENST00000525846 6405 ntBASIC15.47■□□□□ 0.07
SLC28A1O00337 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
SLC28A1O00337 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC28A1O00337 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SLC28A1O00337 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC28A1O00337 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC28A1O00337 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
SLC28A1O00337 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC28A1O00337 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC28A1O00337 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC28A1O00337 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.47■□□□□ 0.07
SLC28A1O00337 AL138918.1-201ENST00000568306 659 ntBASIC15.47■□□□□ 0.07
SLC28A1O00337 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC28A1O00337 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC28A1O00337 AC099522.2-201ENST00000607001 744 ntBASIC15.47■□□□□ 0.07
SLC28A1O00337 AL513190.1-201ENST00000621254 727 ntBASIC15.47■□□□□ 0.07
SLC28A1O00337 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.47■□□□□ 0.07
SLC28A1O00337 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SLC28A1O00337 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.47■□□□□ 0.07
SLC28A1O00337 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 AC068418.2-201ENST00000577309 3703 ntBASIC15.47■□□□□ 0.07
SLC28A1O00337 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC28A1O00337 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SLC28A1O00337 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
SLC28A1O00337 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC28A1O00337 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
SLC28A1O00337 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A1O00337 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC28A1O00337 AC144831.1-201ENST00000573312 2656 ntBASIC15.46■□□□□ 0.07
SLC28A1O00337 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A1O00337 AL691432.1-201ENST00000596308 1422 ntBASIC15.46■□□□□ 0.07
SLC28A1O00337 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A1O00337 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A1O00337 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A1O00337 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A1O00337 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A1O00337 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC28A1O00337 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A1O00337 AL591424.1-201ENST00000442569 1213 ntBASIC15.46■□□□□ 0.07
SLC28A1O00337 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC28A1O00337 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC28A1O00337 AC061975.2-201ENST00000581722 295 ntBASIC15.46■□□□□ 0.07
SLC28A1O00337 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms