Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
KCNQ4P56696 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KCNQ4P56696 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.2■□□□□ 0.82
KCNQ4P56696 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNQ4P56696 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KCNQ4P56696 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNQ4P56696 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
KCNQ4P56696 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 NUS1P3-201ENST00000423502 862 ntBASIC20.2■□□□□ 0.82
KCNQ4P56696 AC004898.1-201ENST00000451057 766 ntBASIC20.2■□□□□ 0.82
KCNQ4P56696 PHKG1P2-201ENST00000457537 863 ntBASIC20.2■□□□□ 0.82
KCNQ4P56696 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.2■□□□□ 0.82
KCNQ4P56696 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KCNQ4P56696 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.2■□□□□ 0.82
KCNQ4P56696 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
KCNQ4P56696 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.2■□□□□ 0.82
KCNQ4P56696 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNQ4P56696 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNQ4P56696 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNQ4P56696 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNQ4P56696 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ4P56696 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ4P56696 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ4P56696 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNQ4P56696 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ4P56696 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ4P56696 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.19■□□□□ 0.82
KCNQ4P56696 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ4P56696 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ4P56696 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ4P56696 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.19■□□□□ 0.82
KCNQ4P56696 AC097724.1-201ENST00000609581 426 ntBASIC20.19■□□□□ 0.82
KCNQ4P56696 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ4P56696 HLA-A-202ENST00000376806 1854 ntBASIC20.19■□□□□ 0.82
KCNQ4P56696 AC018892.3-201ENST00000623986 2499 ntBASIC20.19■□□□□ 0.82
KCNQ4P56696 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
KCNQ4P56696 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNQ4P56696 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ4P56696 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ4P56696 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNQ4P56696 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNQ4P56696 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNQ4P56696 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ4P56696 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
KCNQ4P56696 AC105020.1-201ENST00000435356 2205 ntBASIC20.18■□□□□ 0.82
KCNQ4P56696 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNQ4P56696 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ4P56696 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KCNQ4P56696 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
KCNQ4P56696 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ4P56696 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ4P56696 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ4P56696 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.18■□□□□ 0.82
KCNQ4P56696 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNQ4P56696 AC091804.1-201ENST00000486888 567 ntBASIC20.18■□□□□ 0.82
KCNQ4P56696 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.18■□□□□ 0.82
KCNQ4P56696 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.18■□□□□ 0.82
KCNQ4P56696 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.18■□□□□ 0.82
KCNQ4P56696 AC020914.3-201ENST00000594712 304 ntBASIC20.18■□□□□ 0.82
KCNQ4P56696 AC000095.1-201ENST00000603208 874 ntBASIC20.18■□□□□ 0.82
KCNQ4P56696 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ4P56696 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ4P56696 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNQ4P56696 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ4P56696 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNQ4P56696 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 REXO1L1P-202ENST00000608646 1974 ntBASIC20.17■□□□□ 0.82
KCNQ4P56696 AC078925.2-201ENST00000624013 1973 ntBASIC20.17■□□□□ 0.82
KCNQ4P56696 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.17■□□□□ 0.82
KCNQ4P56696 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.17■□□□□ 0.82
KCNQ4P56696 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KCNQ4P56696 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KCNQ4P56696 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KCNQ4P56696 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KCNQ4P56696 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms