Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PTPN3P26045 AC004987.2-201ENST00000395959 1148 ntBASIC16.38■□□□□ 0.21
PTPN3P26045 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN3P26045 AL139010.1-201ENST00000454878 894 ntBASIC16.38■□□□□ 0.21
PTPN3P26045 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN3P26045 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.38■□□□□ 0.21
PTPN3P26045 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN3P26045 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN3P26045 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.38■□□□□ 0.21
PTPN3P26045 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PTPN3P26045 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN3P26045 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.38■□□□□ 0.21
PTPN3P26045 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PTPN3P26045 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
PTPN3P26045 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PTPN3P26045 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PTPN3P26045 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.38■□□□□ 0.21
PTPN3P26045 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PTPN3P26045 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.37■□□□□ 0.21
PTPN3P26045 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.37■□□□□ 0.21
PTPN3P26045 AC018892.3-201ENST00000623986 2499 ntBASIC16.37■□□□□ 0.21
PTPN3P26045 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
PTPN3P26045 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PTPN3P26045 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PTPN3P26045 RBPMS2P1-201ENST00000437762 623 ntBASIC16.37■□□□□ 0.21
PTPN3P26045 SPDYE14P-201ENST00000442619 822 ntBASIC16.37■□□□□ 0.21
PTPN3P26045 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.37■□□□□ 0.21
PTPN3P26045 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PTPN3P26045 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.37■□□□□ 0.21
PTPN3P26045 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.37■□□□□ 0.21
PTPN3P26045 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PTPN3P26045 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
PTPN3P26045 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.37■□□□□ 0.21
PTPN3P26045 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PTPN3P26045 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PTPN3P26045 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.36■□□□□ 0.21
PTPN3P26045 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PTPN3P26045 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.36■□□□□ 0.21
PTPN3P26045 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.36■□□□□ 0.21
PTPN3P26045 AC023141.5-201ENST00000458585 616 ntBASIC16.36■□□□□ 0.21
PTPN3P26045 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.36■□□□□ 0.21
PTPN3P26045 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.36■□□□□ 0.21
PTPN3P26045 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.36■□□□□ 0.21
PTPN3P26045 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.36■□□□□ 0.21
PTPN3P26045 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.36■□□□□ 0.21
PTPN3P26045 AC009093.7-201ENST00000623853 1223 ntBASIC16.36■□□□□ 0.21
PTPN3P26045 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.36■□□□□ 0.21
PTPN3P26045 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTPN3P26045 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PTPN3P26045 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 REXO1L1P-202ENST00000608646 1974 ntBASIC16.36■□□□□ 0.21
PTPN3P26045 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.36■□□□□ 0.21
PTPN3P26045 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PTPN3P26045 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.36■□□□□ 0.21
PTPN3P26045 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.36■□□□□ 0.21
PTPN3P26045 FER1L4-210ENST00000615531 5998 ntBASIC16.36■□□□□ 0.21
PTPN3P26045 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.36■□□□□ 0.21
PTPN3P26045 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PTPN3P26045 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PTPN3P26045 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.35■□□□□ 0.21
PTPN3P26045 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PTPN3P26045 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.35■□□□□ 0.21
PTPN3P26045 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PTPN3P26045 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms