Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RARAP10276 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.89■□□□□ 0.29
RARAP10276 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RARAP10276 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.89■□□□□ 0.29
RARAP10276 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RARAP10276 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RARAP10276 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 AC020658.6-201ENST00000623564 1870 ntBASIC16.88■□□□□ 0.29
RARAP10276 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.88■□□□□ 0.29
RARAP10276 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.88■□□□□ 0.29
RARAP10276 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.88■□□□□ 0.29
RARAP10276 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 AC142381.1-201ENST00000426099 345 ntBASIC16.88■□□□□ 0.29
RARAP10276 AC245100.5-201ENST00000452108 331 ntBASIC16.88■□□□□ 0.29
RARAP10276 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.88■□□□□ 0.29
RARAP10276 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.88■□□□□ 0.29
RARAP10276 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.88■□□□□ 0.29
RARAP10276 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.88■□□□□ 0.29
RARAP10276 LINC01225-203ENST00000563550 1244 ntBASIC16.88■□□□□ 0.29
RARAP10276 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.88■□□□□ 0.29
RARAP10276 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
RARAP10276 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RARAP10276 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.88■□□□□ 0.29
RARAP10276 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RARAP10276 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.87■□□□□ 0.29
RARAP10276 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RARAP10276 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 CICP13-201ENST00000422015 2789 ntBASIC16.87■□□□□ 0.29
RARAP10276 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.87■□□□□ 0.29
RARAP10276 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 HTR5BP-201ENST00000430851 1154 ntBASIC16.87■□□□□ 0.29
RARAP10276 SPCS2P4-201ENST00000436160 681 ntBASIC16.87■□□□□ 0.29
RARAP10276 MKNK2P1-201ENST00000437526 628 ntBASIC16.87■□□□□ 0.29
RARAP10276 ACTG1P14-201ENST00000446382 1122 ntBASIC16.87■□□□□ 0.29
RARAP10276 SPDYE11-202ENST00000450699 704 ntBASIC16.87■□□□□ 0.29
RARAP10276 RN7SL589P-201ENST00000481268 310 ntBASIC16.87■□□□□ 0.29
RARAP10276 AC079140.1-201ENST00000508039 487 ntBASIC16.87■□□□□ 0.29
RARAP10276 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.87■□□□□ 0.29
RARAP10276 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.87■□□□□ 0.29
RARAP10276 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.87■□□□□ 0.29
RARAP10276 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.87■□□□□ 0.29
RARAP10276 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.87■□□□□ 0.29
RARAP10276 SPDYE9P-201ENST00000570642 692 ntBASIC16.87■□□□□ 0.29
RARAP10276 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 SPDYE10P-202ENST00000612005 668 ntBASIC16.87■□□□□ 0.29
RARAP10276 SPDYE8P-202ENST00000612377 668 ntBASIC16.87■□□□□ 0.29
RARAP10276 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.87■□□□□ 0.29
RARAP10276 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RARAP10276 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RARAP10276 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 TNRC18P2-201ENST00000417666 2714 ntBASIC16.87■□□□□ 0.29
RARAP10276 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RARAP10276 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms