Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.05■□□□□ 0.16
NDUFS3O75489 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.05■□□□□ 0.16
NDUFS3O75489 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NDUFS3O75489 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.05■□□□□ 0.16
NDUFS3O75489 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.05■□□□□ 0.16
NDUFS3O75489 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
NDUFS3O75489 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.05■□□□□ 0.16
NDUFS3O75489 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.05■□□□□ 0.16
NDUFS3O75489 AC069335.1-201ENST00000489972 472 ntBASIC16.05■□□□□ 0.16
NDUFS3O75489 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NDUFS3O75489 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 SLC25A39P2-201ENST00000537614 270 ntBASIC16.05■□□□□ 0.16
NDUFS3O75489 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.05■□□□□ 0.16
NDUFS3O75489 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.05■□□□□ 0.16
NDUFS3O75489 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.05■□□□□ 0.16
NDUFS3O75489 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.05■□□□□ 0.16
NDUFS3O75489 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NDUFS3O75489 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NDUFS3O75489 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.05■□□□□ 0.16
NDUFS3O75489 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.04■□□□□ 0.16
NDUFS3O75489 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.04■□□□□ 0.16
NDUFS3O75489 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
NDUFS3O75489 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.04■□□□□ 0.16
NDUFS3O75489 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
NDUFS3O75489 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.04■□□□□ 0.16
NDUFS3O75489 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.04■□□□□ 0.16
NDUFS3O75489 AC112482.1-201ENST00000492080 688 ntBASIC16.04■□□□□ 0.16
NDUFS3O75489 YBX1P5-201ENST00000509441 847 ntBASIC16.04■□□□□ 0.16
NDUFS3O75489 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.04■□□□□ 0.16
NDUFS3O75489 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.04■□□□□ 0.16
NDUFS3O75489 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NDUFS3O75489 AC022145.2-201ENST00000598203 171 ntBASIC16.04■□□□□ 0.16
NDUFS3O75489 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
NDUFS3O75489 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NDUFS3O75489 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.04■□□□□ 0.16
NDUFS3O75489 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NDUFS3O75489 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NDUFS3O75489 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
NDUFS3O75489 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NDUFS3O75489 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.03■□□□□ 0.16
NDUFS3O75489 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.03■□□□□ 0.16
NDUFS3O75489 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.03■□□□□ 0.16
NDUFS3O75489 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NDUFS3O75489 UPF3AP3-201ENST00000420996 769 ntBASIC16.03■□□□□ 0.16
NDUFS3O75489 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.03■□□□□ 0.16
NDUFS3O75489 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NDUFS3O75489 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.03■□□□□ 0.16
NDUFS3O75489 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms