Protein–RNA interactions for Protein: O60337

MARCH6, E3 ubiquitin-protein ligase MARCH6, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH6O60337 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MARCH6O60337 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.37■□□□□ 0.53
MARCH6O60337 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH6O60337 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH6O60337 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH6O60337 MTHFR-217ENST00000641820 1569 ntBASIC18.37■□□□□ 0.53
MARCH6O60337 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH6O60337 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.37■□□□□ 0.53
MARCH6O60337 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH6O60337 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.37■□□□□ 0.53
MARCH6O60337 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MARCH6O60337 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
MARCH6O60337 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
MARCH6O60337 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.36■□□□□ 0.53
MARCH6O60337 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.36■□□□□ 0.53
MARCH6O60337 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.36■□□□□ 0.53
MARCH6O60337 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.36■□□□□ 0.53
MARCH6O60337 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.36■□□□□ 0.53
MARCH6O60337 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.36■□□□□ 0.53
MARCH6O60337 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 AC093028.1-201ENST00000622998 982 ntBASIC18.36■□□□□ 0.53
MARCH6O60337 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH6O60337 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
MARCH6O60337 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MARCH6O60337 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.35■□□□□ 0.53
MARCH6O60337 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.35■□□□□ 0.53
MARCH6O60337 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.35■□□□□ 0.53
MARCH6O60337 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MARCH6O60337 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.35■□□□□ 0.53
MARCH6O60337 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MARCH6O60337 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.35■□□□□ 0.53
MARCH6O60337 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.35■□□□□ 0.53
MARCH6O60337 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.35■□□□□ 0.53
MARCH6O60337 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.35■□□□□ 0.53
MARCH6O60337 AC092183.1-201ENST00000469884 875 ntBASIC18.35■□□□□ 0.53
MARCH6O60337 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.35■□□□□ 0.53
MARCH6O60337 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 AC061975.2-201ENST00000581722 295 ntBASIC18.35■□□□□ 0.53
MARCH6O60337 MIR4453-201ENST00000584019 89 ntBASIC18.35■□□□□ 0.53
MARCH6O60337 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.35■□□□□ 0.53
MARCH6O60337 AC026979.3-201ENST00000607315 403 ntBASIC18.35■□□□□ 0.53
MARCH6O60337 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.35■□□□□ 0.53
MARCH6O60337 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.35■□□□□ 0.53
MARCH6O60337 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH6O60337 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH6O60337 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.34■□□□□ 0.53
MARCH6O60337 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.34■□□□□ 0.53
MARCH6O60337 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH6O60337 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.34■□□□□ 0.53
MARCH6O60337 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.34■□□□□ 0.53
MARCH6O60337 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH6O60337 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MARCH6O60337 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH6O60337 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH6O60337 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.34■□□□□ 0.53
MARCH6O60337 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MARCH6O60337 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.34■□□□□ 0.53
MARCH6O60337 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms