Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COCHO43405 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COCHO43405 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COCHO43405 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 AC006449.5-201ENST00000610658 2098 ntBASIC16.5■□□□□ 0.23
COCHO43405 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COCHO43405 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.5■□□□□ 0.23
COCHO43405 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
COCHO43405 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
COCHO43405 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.5■□□□□ 0.23
COCHO43405 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.5■□□□□ 0.23
COCHO43405 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.5■□□□□ 0.23
COCHO43405 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.5■□□□□ 0.23
COCHO43405 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.5■□□□□ 0.23
COCHO43405 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.5■□□□□ 0.23
COCHO43405 CTBP2P3-201ENST00000585629 1255 ntBASIC16.5■□□□□ 0.23
COCHO43405 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 AC097359.3-201ENST00000603982 1210 ntBASIC16.5■□□□□ 0.23
COCHO43405 AL158212.4-201ENST00000624062 1286 ntBASIC16.5■□□□□ 0.23
COCHO43405 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COCHO43405 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
COCHO43405 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COCHO43405 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.5■□□□□ 0.23
COCHO43405 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COCHO43405 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.49■□□□□ 0.23
COCHO43405 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
COCHO43405 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COCHO43405 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.49■□□□□ 0.23
COCHO43405 KRT17P7-201ENST00000451704 1104 ntBASIC16.49■□□□□ 0.23
COCHO43405 RN7SL752P-201ENST00000463779 287 ntBASIC16.49■□□□□ 0.23
COCHO43405 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
COCHO43405 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.49■□□□□ 0.23
COCHO43405 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
COCHO43405 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.49■□□□□ 0.23
COCHO43405 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
COCHO43405 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COCHO43405 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.49■□□□□ 0.23
COCHO43405 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 AC011477.6-201ENST00000604980 1927 ntBASIC16.49■□□□□ 0.23
COCHO43405 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COCHO43405 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
COCHO43405 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COCHO43405 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COCHO43405 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms