Protein–RNA interactions for Protein: O14874

BCKDK, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDKO14874 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.34■□□□□ 0.05
BCKDKO14874 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDKO14874 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDKO14874 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDKO14874 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDKO14874 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.33■□□□□ 0.05
BCKDKO14874 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
BCKDKO14874 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
BCKDKO14874 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDKO14874 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
BCKDKO14874 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
BCKDKO14874 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
BCKDKO14874 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.33■□□□□ 0.05
BCKDKO14874 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
BCKDKO14874 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
BCKDKO14874 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDKO14874 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDKO14874 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.33■□□□□ 0.04
BCKDKO14874 SLC25A6P2-201ENST00000497974 877 ntBASIC15.33■□□□□ 0.04
BCKDKO14874 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
BCKDKO14874 AP000344.2-201ENST00000512987 629 ntBASIC15.33■□□□□ 0.04
BCKDKO14874 AC112191.1-201ENST00000523689 701 ntBASIC15.33■□□□□ 0.04
BCKDKO14874 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
BCKDKO14874 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.33■□□□□ 0.04
BCKDKO14874 AL031432.2-201ENST00000566714 459 ntBASIC15.33■□□□□ 0.04
BCKDKO14874 AL928711.1-201ENST00000570165 459 ntBASIC15.33■□□□□ 0.04
BCKDKO14874 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.33■□□□□ 0.04
BCKDKO14874 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.33■□□□□ 0.04
BCKDKO14874 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.33■□□□□ 0.04
BCKDKO14874 ACTL9-202ENST00000612068 1252 ntBASIC15.33■□□□□ 0.04
BCKDKO14874 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.33■□□□□ 0.04
BCKDKO14874 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.33■□□□□ 0.04
BCKDKO14874 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
BCKDKO14874 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
BCKDKO14874 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDKO14874 AC112504.1-201ENST00000623415 1841 ntBASIC15.33■□□□□ 0.04
BCKDKO14874 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
BCKDKO14874 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.33■□□□□ 0.04
BCKDKO14874 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.33■□□□□ 0.04
BCKDKO14874 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDKO14874 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDKO14874 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDKO14874 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.33■□□□□ 0.04
BCKDKO14874 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDKO14874 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.33■□□□□ 0.04
BCKDKO14874 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDKO14874 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
BCKDKO14874 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BCKDKO14874 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.32■□□□□ 0.04
BCKDKO14874 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.32■□□□□ 0.04
BCKDKO14874 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.32■□□□□ 0.04
BCKDKO14874 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.32■□□□□ 0.04
BCKDKO14874 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BCKDKO14874 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
BCKDKO14874 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 REXO1L8P-201ENST00000604378 1897 ntBASIC15.32■□□□□ 0.04
BCKDKO14874 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
BCKDKO14874 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.32■□□□□ 0.04
BCKDKO14874 METTL21AP1-201ENST00000438852 635 ntBASIC15.32■□□□□ 0.04
BCKDKO14874 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
BCKDKO14874 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.32■□□□□ 0.04
BCKDKO14874 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.32■□□□□ 0.04
BCKDKO14874 AC027796.2-201ENST00000575326 344 ntBASIC15.32■□□□□ 0.04
BCKDKO14874 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
BCKDKO14874 AL645728.2-201ENST00000641974 660 ntBASIC15.32■□□□□ 0.04
BCKDKO14874 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
BCKDKO14874 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
BCKDKO14874 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BCKDKO14874 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.32■□□□□ 0.04
BCKDKO14874 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BCKDKO14874 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDKO14874 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BCKDKO14874 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms