Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00473A8K010 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00473A8K010 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
LINC00473A8K010 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
LINC00473A8K010 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.09□□□□□ -0.31
LINC00473A8K010 RARRES2P8-201ENST00000566335 367 ntBASIC13.09□□□□□ -0.31
LINC00473A8K010 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00473A8K010 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.09□□□□□ -0.31
LINC00473A8K010 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00473A8K010 AC087481.3-201ENST00000602886 1894 ntBASIC13.09□□□□□ -0.31
LINC00473A8K010 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
LINC00473A8K010 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00473A8K010 AC105250.1-201ENST00000509378 2057 ntBASIC13.09□□□□□ -0.31
LINC00473A8K010 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.09□□□□□ -0.31
LINC00473A8K010 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
LINC00473A8K010 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
LINC00473A8K010 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LINC00473A8K010 AC018892.3-201ENST00000623986 2499 ntBASIC13.08□□□□□ -0.31
LINC00473A8K010 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00473A8K010 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.08□□□□□ -0.31
LINC00473A8K010 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.08□□□□□ -0.31
LINC00473A8K010 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
LINC00473A8K010 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.08□□□□□ -0.31
LINC00473A8K010 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LINC00473A8K010 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
LINC00473A8K010 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 AC090616.6-203ENST00000579186 1945 ntBASIC13.08□□□□□ -0.32
LINC00473A8K010 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00473A8K010 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00473A8K010 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
LINC00473A8K010 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 AL590627.1-203ENST00000421194 1026 ntBASIC13.08□□□□□ -0.32
LINC00473A8K010 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.08□□□□□ -0.32
LINC00473A8K010 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 AC098859.1-201ENST00000502915 1238 ntBASIC13.08□□□□□ -0.32
LINC00473A8K010 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 SLC25A1P1-201ENST00000528351 927 ntBASIC13.08□□□□□ -0.32
LINC00473A8K010 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00473A8K010 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00473A8K010 AC061975.2-201ENST00000581722 295 ntBASIC13.08□□□□□ -0.32
LINC00473A8K010 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00473A8K010 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.08□□□□□ -0.32
LINC00473A8K010 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.08□□□□□ -0.32
LINC00473A8K010 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 TNRC18P2-201ENST00000417666 2714 ntBASIC13.08□□□□□ -0.32
LINC00473A8K010 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.08□□□□□ -0.32
LINC00473A8K010 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.08□□□□□ -0.32
LINC00473A8K010 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LINC00473A8K010 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00473A8K010 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
LINC00473A8K010 ZNF259P1-201ENST00000407656 1365 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms