Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 AC141586.1-203ENST00000567242 366 ntBASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 HCG11-201ENST00000411553 5696 ntBASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM88BA6NKF7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 AL138799.1-201ENST00000448213 1675 ntBASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 AC097065.1-201ENST00000425737 517 ntBASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 CTBP2P4-201ENST00000513884 920 ntBASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 IGLV3-15-201ENST00000518356 244 ntBASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 PPY2P-201ENST00000582808 702 ntBASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 AC087045.2-201ENST00000606279 1003 ntBASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 AL023803.2-201ENST00000620080 638 ntBASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 AL805961.1-203ENST00000641078 1258 ntBASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TMEM88BA6NKF7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AL353637.1-201ENST00000451571 732 ntBASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 GAPDHP40-201ENST00000505218 1006 ntBASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AC106794.1-201ENST00000506935 792 ntBASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AC013355.1-201ENST00000562625 723 ntBASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AC020922.3-201ENST00000595064 547 ntBASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AC012044.1-201ENST00000603431 297 ntBASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AC022748.3-201ENST00000621828 275 ntBASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM88BA6NKF7 AL805961.1-201ENST00000642026 753 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms