Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 AC099568.2-201ENST00000609194 695 ntBASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 AL008721.1-201ENST00000609964 604 ntBASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.96■□□□□ 0.15
TBC1D3FA6NER0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TBC1D3FA6NER0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TBC1D3FA6NER0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
TBC1D3FA6NER0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TBC1D3FA6NER0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TBC1D3FA6NER0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TBC1D3FA6NER0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TBC1D3FA6NER0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AL512384.1-201ENST00000406683 331 ntBASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AZGP1P1-201ENST00000411909 902 ntBASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AC132938.2-201ENST00000579188 680 ntBASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AC093726.1-201ENST00000608064 963 ntBASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AL591163.1-201ENST00000641757 987 ntBASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 BNIP3P1-202ENST00000550043 1585 ntBASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TBC1D3FA6NER0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TBC1D3FA6NER0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TBC1D3FA6NER0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms