Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC78A2IDD5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC78A2IDD5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 MIR648-201ENST00000385046 94 ntBASIC16.33■□□□□ 0.2
CCDC78A2IDD5 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 MCCD1P2-201ENST00000423228 335 ntBASIC16.33■□□□□ 0.2
CCDC78A2IDD5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 FOXO1B-201ENST00000504678 1527 ntBASIC16.33■□□□□ 0.2
CCDC78A2IDD5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC78A2IDD5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 AC004832.2-201ENST00000426397 482 ntBASIC16.32■□□□□ 0.2
CCDC78A2IDD5 HTR5BP-201ENST00000430851 1154 ntBASIC16.32■□□□□ 0.2
CCDC78A2IDD5 ADH5P3-201ENST00000433842 1137 ntBASIC16.32■□□□□ 0.2
CCDC78A2IDD5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SPDYE11-202ENST00000450699 704 ntBASIC16.32■□□□□ 0.2
CCDC78A2IDD5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SPDYE9P-201ENST00000570642 692 ntBASIC16.32■□□□□ 0.2
CCDC78A2IDD5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 AP005117.1-202ENST00000581724 1908 ntBASIC16.32■□□□□ 0.2
CCDC78A2IDD5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC78A2IDD5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms