Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC23.73■■□□□ 1.39
CDC42BPBQ9Y5S2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 FLJ38576-201ENST00000623820 2459 ntBASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 TISP43-201ENST00000409793 538 ntTSL 4 BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 EIF4HP1-201ENST00000453115 687 ntBASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 BX284668.4-201ENST00000453917 508 ntBASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CDC42BPBQ9Y5S2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 DEF8-202ENST00000418391 852 ntTSL 2 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 EIF3FP3-201ENST00000434851 1086 ntBASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 AC015967.2-201ENST00000624092 234 ntBASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 AC006435.4-201ENST00000625037 234 ntBASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 AL356737.1-201ENST00000634391 234 ntBASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
CDC42BPBQ9Y5S2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 RNA5SP486-201ENST00000515961 83 ntBASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 MIR4313-201ENST00000580760 101 ntBASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 AL451050.2-201ENST00000606967 682 ntBASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDC42BPBQ9Y5S2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 AL138799.1-201ENST00000448213 1675 ntBASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 AC079178.1-201ENST00000420915 656 ntBASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 AC005730.2-201ENST00000564549 1184 ntBASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 AC132938.4-201ENST00000623835 848 ntBASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDC42BPBQ9Y5S2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDC42BPBQ9Y5S2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC23.69■■□□□ 1.38
CDC42BPBQ9Y5S2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
CDC42BPBQ9Y5S2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC23.69■■□□□ 1.38
CDC42BPBQ9Y5S2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CDC42BPBQ9Y5S2 KRT8P19-201ENST00000551916 1455 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms