Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 AZGP1P1-201ENST00000411909 902 ntBASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 POM121L10P-201ENST00000436994 1285 ntBASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 HOMER2P2-201ENST00000451621 847 ntBASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 IMP3P2-201ENST00000489760 475 ntBASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 MIR4741-201ENST00000579822 90 ntBASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 MIR5572-201ENST00000583188 137 ntBASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 AL138688.1-201ENST00000624851 1594 ntBASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZC3H4Q9UPT8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 TARDBPP1-201ENST00000442013 1203 ntBASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 FTLP1-201ENST00000449155 526 ntBASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 RN7SL720P-201ENST00000488178 304 ntBASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 AP002490.2-201ENST00000524791 560 ntBASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 AC078819.1-201ENST00000547454 765 ntBASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 AC012085.1-201ENST00000548270 765 ntBASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZC3H4Q9UPT8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms