Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM35Q9UPQ4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM35Q9UPQ4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM35Q9UPQ4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM35Q9UPQ4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 AC138761.1-201ENST00000584393 385 ntBASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 AC007950.2-201ENST00000615045 2347 ntBASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRIM35Q9UPQ4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 AC009118.2-201ENST00000613275 655 ntBASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 AC022188.1-201ENST00000620960 1664 ntBASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 AC008894.3-201ENST00000624324 3103 ntBASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM35Q9UPQ4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM35Q9UPQ4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms