Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC004987.2-201ENST00000395959 1148 ntBASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 CHMP1AP1-201ENST00000445563 662 ntBASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 RCC2P8-201ENST00000502779 1035 ntBASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
COL25A1Q9BXS0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 AC023906.1-201ENST00000486386 453 ntBASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 MIR3677-201ENST00000578964 60 ntBASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 AC005324.6-201ENST00000587972 613 ntBASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 ENPP7P14-201ENST00000621765 1040 ntBASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 AC005618.3-201ENST00000624928 458 ntBASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
COL25A1Q9BXS0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 AC010900.1-201ENST00000449849 1296 ntBASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 AC093909.3-201ENST00000504783 336 ntBASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 ABHD17AP9-201ENST00000561925 548 ntBASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 OR10B1P-201ENST00000601666 907 ntBASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 AL451007.2-201ENST00000632004 563 ntBASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 IL9RP3-201ENST00000442856 1674 ntBASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.85■□□□□ 0.13
COL25A1Q9BXS0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms