Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS2Q99743 AC087163.2-201ENST00000457299 853 ntBASIC15.81■□□□□ 0.12
NPAS2Q99743 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.81■□□□□ 0.12
NPAS2Q99743 SLC22A20-204ENST00000530038 1673 ntBASIC15.81■□□□□ 0.12
NPAS2Q99743 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 KRT19P2-202ENST00000557173 1012 ntBASIC15.81■□□□□ 0.12
NPAS2Q99743 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 CYP2A7P1-201ENST00000595391 815 ntBASIC15.81■□□□□ 0.12
NPAS2Q99743 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS2Q99743 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS2Q99743 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS2Q99743 AC023157.3-201ENST00000619086 2088 ntBASIC15.81■□□□□ 0.12
NPAS2Q99743 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS2Q99743 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS2Q99743 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NPAS2Q99743 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NPAS2Q99743 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS2Q99743 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS2Q99743 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NPAS2Q99743 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS2Q99743 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NPAS2Q99743 BCAR1-209ENST00000546196 1340 ntBASIC15.8■□□□□ 0.12
NPAS2Q99743 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS2Q99743 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS2Q99743 MIR648-201ENST00000385046 94 ntBASIC15.8■□□□□ 0.12
NPAS2Q99743 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS2Q99743 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.8■□□□□ 0.12
NPAS2Q99743 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS2Q99743 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS2Q99743 CXCL1P1-201ENST00000502804 216 ntBASIC15.8■□□□□ 0.12
NPAS2Q99743 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS2Q99743 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NPAS2Q99743 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS2Q99743 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS2Q99743 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.8■□□□□ 0.12
NPAS2Q99743 PDPK2P-202ENST00000562415 1191 ntBASIC15.8■□□□□ 0.12
NPAS2Q99743 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS2Q99743 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NPAS2Q99743 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS2Q99743 MIR3687-2-201ENST00000577708 61 ntBASIC15.8■□□□□ 0.12
NPAS2Q99743 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.8■□□□□ 0.12
NPAS2Q99743 ACTL9-202ENST00000612068 1252 ntBASIC15.8■□□□□ 0.12
NPAS2Q99743 MIR3687-1-201ENST00000614492 61 ntBASIC15.8■□□□□ 0.12
NPAS2Q99743 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS2Q99743 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS2Q99743 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS2Q99743 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS2Q99743 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.8■□□□□ 0.12
NPAS2Q99743 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS2Q99743 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.79■□□□□ 0.12
NPAS2Q99743 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS2Q99743 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 AC025580.3-201ENST00000617932 1424 ntBASIC15.79■□□□□ 0.12
NPAS2Q99743 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NPAS2Q99743 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS2Q99743 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.79■□□□□ 0.12
NPAS2Q99743 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NPAS2Q99743 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 FAM185BP-201ENST00000443595 716 ntBASIC15.79■□□□□ 0.12
NPAS2Q99743 AC092183.1-201ENST00000469884 875 ntBASIC15.79■□□□□ 0.12
NPAS2Q99743 AC091167.2-201ENST00000579581 588 ntBASIC15.79■□□□□ 0.12
NPAS2Q99743 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS2Q99743 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.79■□□□□ 0.12
NPAS2Q99743 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS2Q99743 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NPAS2Q99743 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms